Limnohabitans sp. INBF002: LINBF2_09680
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Entry
LINBF2_09680 CDS
T09962
Symbol
pheT
Name
(GenBank) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LINBF2_09680 (pheT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
limi01007
]
LINBF2_09680 (pheT)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limi03016
]
LINBF2_09680 (pheT)
Enzymes [BR:
limi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
LINBF2_09680 (pheT)
Amino acid related enzymes [BR:
limi01007
]
Aminoacyl-tRNA synthetase
Class II (U)
LINBF2_09680 (pheT)
Transfer RNA biogenesis [BR:
limi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LINBF2_09680 (pheT)
Prokaryotic type
LINBF2_09680 (pheT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
B3_4
tRNA_bind
FDX-ACB
B5
CDC73_N
Motif
Other DBs
NCBI-ProteinID:
BDU52733
LinkDB
All DBs
Position
956235..958661
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AA seq
808 aa
AA seq
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MQFPESWLREFCNPSLTTQALADTLTMAGLEVEELQPVAPPFTGIVVGEIKEAVQHPDAD
RLRICKVDVGQGALLNIVCGAPNARVGIKIPCATVGAELPPGEDGKPFKIKVGKLRGVES
QGMLCSAKELKIADDNGGLLELPADAPLGQNIREYLNLDDTLMTLKLTPNLAHCLSVYGI
AREVSALTGAPLKAPTFPAVAATNQDTLAVKISAPDLCGRFSGRVVRGVNTKAQTPAWMV
NHLARCGQRSVSPLVDISNYVMFELGRPSHIFDLDKIQGGLDVRWGKVGEQLKLLNGNTV
TVDDKVGVIADAHQVESLAGIMGGDATAVNDDTQNIYIEAAFWWPSAIAGRSRRFNFSTD
AGHRFERGVDPELTVEHIERITQLVIDICGTPNTTVGPIDDQRVNMPVAKPVTLRVARAE
KVIGMPLTQQRVADALRGLGLPVIEGEGVVTVQPPSFRFDLQIEEDLIEEVARMVGYNNL
PTTPPLAPITASVCQEAQRSPHALRHHLAALGYQETINYSFVDERWEHELAGNANPIKLL
NPIASQMSVMRSTLLGSLLNVVKFNVDRKASRVRVFELGRVFHKDASVQNTDTTVQGFDQ
PMHVAGIAFGSAAPLQWGTKEQAADFFDVKADVEALLAPAVPQFEAAEHPAMHPGRCAKV
LVNGQAVGHVGELHPRWRQGWDLAQAPVMFELSLDAVLRRDVPKSTGVAKFPNVERDIAV
IVKDSVTHAQLMAAVHAAKTQGLLRNAVLFDVYRPKAESAAMAMDEKSLAVRLTLNSDEA
TLNEAQIEGVVQAVLAELAAQVSARLRA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcaattccccgaatcctggttgcgcgaattctgcaacccctcactcaccacccaagcg
ctggccgacaccttgaccatggccggtttggaagtggaagaactccaacccgtcgcaccg
cctttcactggcatcgtcgtcggtgaaatcaaagaagctgtgcagcacccagacgctgac
cgcttgcgtatttgcaaagtggacgtggggcagggcgctttgctcaacatcgtgtgcggt
gcacccaatgcacgtgtgggcatcaaaatcccatgtgccaccgtgggcgcagagttgcca
cccggcgaagacggcaagcctttcaaaatcaaagtgggcaagctgcgtggcgtggaaagc
caaggcatgttgtgctcggccaaagaactcaaaattgccgacgacaacggtggcttgctt
gagttgccagccgatgcacctttgggtcagaacatccgcgaatacctgaacctcgacgac
accttgatgacgttgaagctcacgcctaacttggcgcattgcttgagcgtgtatggcatt
gctcgagaagtatcagccctcacaggcgcgcctttgaaggccccgactttccctgccgtt
gccgcgaccaaccaagacaccttggctgtgaaaatcagcgcgcctgatttgtgcggtcgt
ttttctggccgcgtggtgcgtggcgtgaacaccaaggcacaaacgcctgcatggatggtg
aaccacttggcccgttgcggccagcgcagtgtgagccccttggtcgacatctccaactac
gtgatgttcgagttgggccgtccttcgcatatctttgacctcgacaaaatccaaggtggc
ttggatgtgcgttggggcaaagtgggtgaacagctcaagctcttgaatggcaacaccgtc
accgtggacgacaaagtgggcgtcatcgctgacgcgcatcaagttgaatcgctggcaggc
atcatgggtggcgacgccaccgccgtgaacgacgacacgcaaaacatttacatcgaagct
gctttctggtggccctcagccatcgcaggtcgctcacgccgcttcaacttcagcaccgat
gcgggccaccgctttgagcgtggtgtggaccccgagttgaccgttgagcacattgagcgc
atcacccagttggtgattgatatttgcggcacacccaacacaaccgtgggccccatcgac
gaccaacgcgtgaacatgcccgtggccaagcctgtcacgttgcgtgtggcccgtgctgag
aaagtcatcggtatgccactcacgcaacaacgcgtggcagatgctttgcgtggcttgggc
ttgcctgtcatcgagggggagggcgttgtcaccgtccagcccccatccttccgtttcgat
ttgcaaatcgaagaagacctgattgaagaagtggcacgcatggtgggttacaacaacctg
cccaccacaccacctttggcccccatcacggccagtgtgtgccaagaagcacaacgcagc
ccacacgccttgcgccatcacttggcggccttgggctaccaagaaaccatcaactacagc
tttgtggatgagcgttgggaacacgagttggccggtaacgccaatcccatcaaattgctc
aaccccatcgccagccaaatgagcgtgatgcgctctaccttgttgggctctttgctcaac
gtggtgaagttcaacgtggaccgtaaggcatcacgcgtgcgcgtgtttgaattgggtcgc
gtgttccacaaagatgcatccgtgcaaaacacagacaccaccgtgcaaggctttgaccag
cccatgcacgtggcaggcattgcttttggcagcgctgcacctttgcaatggggcaccaaa
gagcaagccgcagacttcttcgacgtgaaagcggatgtggaagctttgttggcccccgct
gtgccgcaatttgaagcggctgagcacccagccatgcaccctggccgctgtgccaaagta
ttggtcaatggtcaagccgtgggccatgtgggcgagttgcacccacgctggcgtcaaggt
tgggacttagcccaagcccccgtgatgtttgaactctcactcgatgccgtgttgcgccgc
gatgtgcccaagtccaccggtgtggccaagttccccaacgtcgagcgcgacattgccgtc
atcgtcaaagacagcgtcacgcacgcccaattaatggctgctgtacatgccgccaaaaca
caaggcttgctgcgcaatgctgtgttgtttgacgtgtatcgccccaaggctgaaagcgca
gccatggcgatggacgaaaagagcttggctgtgcgcttgacgctcaacagcgatgaagcc
actttgaacgaagcccaaatcgaaggcgtggtgcaagccgtgttggctgagttggccgcc
caagtgtctgcgcgtttgcgcgcttga
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