Limnohabitans sp. INBF002: LINBF2_10960
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Entry
LINBF2_10960 CDS
T09962
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase (glutamine-hydrolyzing)
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00220
Arginine biosynthesis
limi00240
Pyrimidine metabolism
limi00250
Alanine, aspartate and glutamate metabolism
limi01100
Metabolic pathways
limi01110
Biosynthesis of secondary metabolites
limi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LINBF2_10960 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LINBF2_10960 (carB)
00220 Arginine biosynthesis
LINBF2_10960 (carB)
Enzymes [BR:
limi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LINBF2_10960 (carB)
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GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
BDU52861
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Position
1089107..1092385
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AA seq
1092 aa
AA seq
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MPKRTDLKSILIIGAGPIIIGQACEFDYSGVQACKALREEGYKVILINSNPATIMTDPAT
ADVTYIEPITWQTVEKIIAKERPDAILPTMGGQTALNCALDLWHHGVLAKYKVELIGATP
EAIDKAEDRLKFKDAMTKIGLGSARSGIAHSMEEAWDVQKSLGFPTVIRPSFTLGGTGGG
IAYNPEEFEIICKRGLEASPTNELLIEESLLGWKEYEMEVVRDKADNCIIICSIENLDPM
GVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVDTGGSNVQFSINPKDGRMVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNEITGGATPASFEPSIDYVVTKIP
RFAFEKFPTADSRLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGMNEKTQDREVLE
KELGEPGPERIWYVGDAFAMGMSVDEVFALTKIDPWFLVQIEEIVKIELELETTSLDAIT
AHELRALKKKGFSDRRLAKLLKTTEHVVRARRHEQGIRPVYKRVDTCAAEFSTDTAYMYS
CYEGNGDAFGVGAAECEAEPTNNKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYET
IMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVDKEKPTGVIVQYGGQTPLKLALGLEA
AGVPIIGTSPDMIDAAEDRERFQKLLQDLGLRQPPNATARTEPEALEKAAALGYPLVVRP
SYVLGGRAMEIVHEQRDLERYMREAVKVSHDSPVLLDRFLNDAIECDVDCLRDPEGKTFI
GGVMEHIEQAGVHSGDSACSLPPYSLSAETVNELKRQSAAMAGALNVVGLMNVQFAIQHV
DGKDVIYVLEVNPRASRTVPYVSKATGIQLAKVAARCMAGQTLASQGITKEVTPPYFSVK
EAVFPFVKFPGVDTILGPEMKSTGEVMGVGKTFGEAFVKSQLGAGTKLPRPRDADGRSTG
KVFISVKNNDKARAIEVARQLSVLGFELIATKGTASAIVEAGVPCDVVNKVTEGRPHIVD
SIKNNEVVLVINTVEERRNAIADSRHIRTSALLNRVTTFTTIAGAEAAVEGMKYMDKLDV
ISVQEMHAQLTA
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcgcaccgacctaaaaagcattctcatcattggcgcaggcccgatcatcatt
ggtcaggcgtgtgagttcgattactccggcgtgcaagcttgtaaagctttgcgtgaagag
ggctacaaagtcatcttgatcaacagcaaccctgccacgatcatgaccgaccctgccacg
gcagacgtcacctacatcgagcccatcacttggcaaacggttgagaagatcattgccaaa
gagcgtcccgatgccatcctgcccaccatgggcggccaaacagcgctgaactgcgcgttg
gatttgtggcaccacggcgtgttggccaagtacaaggttgagctgattggcgcaacgcct
gaggccatcgacaaagccgaagaccgcttgaagttcaaagacgccatgaccaagattggt
ctgggctctgcgcgttcaggcattgcccacagcatggaagaagcgtgggatgtgcaaaag
agtttgggtttccccaccgtcattcgccccagcttcacgctgggtggcacaggcggcggc
attgcctacaaccccgaagaattcgaaattatctgtaagcgcggcttggaagcctcgccc
accaacgagctgttgattgaagaatctttgctcggttggaaagagtacgagatggaagtg
gtgcgcgacaaggcggacaactgcatcatcatttgctcgattgaaaacttggaccccatg
ggcgtgcacaccggtgattccatcacggtggcgcctgcacaaaccttgaccgacaaggaa
taccaaattttgcgtaacgcctctttggctgtgttgcgcgaaatcggtgtggacacgggc
ggttccaacgtgcagttctcgatcaaccccaaagatggccgcatggttgtcattgagatg
aacccacgtgtgtcgcgttcatcggcgttggcttccaaagccacgggtttcccgattgca
aaagtcgctgccaagttggcggtgggttacacgctcgacgagttgcgcaatgaaatcaca
ggcggtgcaacgcctgcgtcgttcgagccctcgattgactacgtggtcaccaaaattcca
cgtttcgcgttcgagaaattcccgactgctgacagccgcttgaccacccaaatgaaatcg
gtcggcgaggtgatggccatgggccgtaccttccaagagtccttccaaaaagccttgcgc
ggtttggaagtgggcgtggacggtatgaacgaaaaaacccaagaccgcgaagtgctcgag
aaggaattgggcgagcccggccccgagcgcatttggtacgtgggcgacgcgttcgccatg
ggcatgagtgtggacgaggtgtttgccttgaccaaaatcgacccttggttcttggtgcaa
atcgaagagattgtgaagattgagcttgagctcgaaaccacatccctcgacgccatcact
gcacacgagttacgcgctttgaaaaagaagggcttctcagaccgccgtttggccaagttg
ctcaaaaccactgaacacgtggtgcgtgcacgccgtcatgaacagggaattcgccccgtc
tacaagcgtgtggacacctgtgcagctgagttctcgacggacacggcttacatgtattcg
tgttacgaaggtaatggcgacgccttcggcgtgggtgctgctgaatgcgaagcagagcct
accaacaacaaaaaaatcatggtgctcggcggcggtcctaaccgcatcggccaaggtatt
gagtttgactactgctgcgttcacgccgcgctcgccatgcgcgaagacggctatgaaacc
atcatggtcaactgcaacccagagaccgtgtcgaccgactacgacacgtctgaccgtttg
tactttgagccattgacacttgaagacgtactcgaaatcgtggacaaagaaaagccaacc
ggcgtcatcgttcagtacggtggtcaaacgcctttgaaattggctttgggcctggaagcg
gctggcgtgccgatcatcggcaccagcccagacatgattgatgcggccgaagaccgtgag
cgtttccaaaagttgttgcaagacctcggtctgcgtcaacctcctaacgccacagcgcgt
accgagccagaagctttggaaaaagccgcagctttgggttaccccttggtcgtacgcccc
agctatgtattgggtggccgcgccatggaaatcgtgcacgagcaacgcgacctcgagcgc
tacatgcgcgaagcggtcaaggtgtcgcatgactcacctgtgttgctcgaccgtttcttg
aacgatgcgattgagtgcgatgtggactgcttgcgcgacccagaaggcaagaccttcatc
ggcggcgtgatggaacacatcgaacaagcaggtgtgcacagcggtgactcggcttgctcg
ttgccgccttactcgttgtcggccgaaaccgtgaacgaacttaagcgccaatctgccgcc
atggccggtgccttgaatgtggtcggcctgatgaacgtgcagttcgcgattcaacacgtg
gatggcaaagacgtcatctatgtgctggaagtcaacccacgcgcgtcacgcaccgtgcct
tatgtgtccaaagccacgggcatccagttggccaaggtcgctgcacgttgcatggccggt
caaactttggcatcgcaaggcatcaccaaagaagtgacacccccttatttcagtgtcaaa
gaagcggtgttccccttcgtgaagttcccaggtgtcgacacgattctcggcccagagatg
aagtccaccggcgaagtcatgggtgtgggcaaaacatttggcgaagcctttgtgaagagc
caactgggcgcaggcaccaagttgcctcgtcctcgcgatgcggatggccgctcgacgggt
aaggtgttcatctcggtgaagaacaacgacaaagcacgtgccatcgaagtggcgcgccag
ttgtctgttttgggctttgagttgattgcaaccaaaggcacagcatctgccattgtggag
gctggcgtgccttgcgatgtggtgaacaaagtgaccgaaggtcgcccacacattgtggac
agtatcaaaaacaacgaagtggtgttggtcatcaacaccgtggaagagcgtcgcaatgca
attgccgattcgcgccacatccgtacctcggcattgctcaaccgtgtgaccactttcaca
accatcgcaggtgcagaagcggctgtggaaggtatgaagtacatggacaagttggatgtc
atttctgtgcaggaaatgcacgctcaactgacggcctaa
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