Limnohabitans sp. INBF002: LINBF2_11100
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Entry
LINBF2_11100 CDS
T09962
Symbol
xerD
Name
(GenBank) tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
limi03036
]
LINBF2_11100 (xerD)
Chromosome and associated proteins [BR:
limi03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LINBF2_11100 (xerD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
BDU52875
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All DBs
Position
1104657..1105574
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AA seq
305 aa
AA seq
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MIAIEASAPDANIDIFIDALWLEHGLAANSLAAYRRDLNLLSVWLQAQGTHLLNAQESDL
QQYFAHRHAETKATSANRRLTVFKRFYRWALRERMLVADPTLKLLTAKQPVRAPKSLTEA
QVESLLNAPDVSTGLGMRDRAMLELIYASGLRVSELVDLKTLHVSLNDGVLRIMGKGSKE
RLVPFGEVARDWLQRYLSEARPALLAGHQTEALFVTVRGKNAGEAMTRAMFWQLIKRYAL
QAQIRMPISPHTLRHAFATHLLNHGADLRAVQMLLGHADISTTTIYTHIARERLKSLHGA
HHPRG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttgattgccatcgaggcgtctgcaccagacgccaacattgacatcttcattgatgcgctc
tggttagagcatggtttggcggccaacagcttggccgcctaccgtcgcgacttgaatttg
ttgtctgtctggcttcaagcccaaggtacgcatttgttgaatgcgcaagagtcagacttg
cagcagtactttgcgcaccgccacgccgagaccaaggccaccagcgccaaccgtcgtttg
acggtgtttaagcgcttttaccgctgggctttgcgagagcgtatgttggtggccgatcca
acgctcaaattgctcacagccaaacagcccgtgcgtgcgcccaaaagcttgactgaggcg
caagtggaaagcttgctcaacgcacctgatgtgtctaccggtttgggcatgcgtgaccgc
gccatgttggagttgatttacgccagtggcttgcgcgtgagcgagttggtggatctcaaa
actttgcatgtgagtctgaacgatggcgtgctgcgcatcatgggcaagggcagcaaagaa
cgcttggtaccgtttggtgaagtggcccgcgattggctgcaacgttatttgagcgaagcg
cgtcccgcgttgttagcaggccaccaaaccgaagctttgtttgtgacggtacgcggcaaa
aacgcaggcgaggccatgacccgcgccatgttttggcagctcatcaagcgctacgcttta
caagcgcaaatccgcatgccgatttcaccgcacaccttgcgccatgcgtttgccacgcat
ttgctcaaccacggtgctgatttacgtgcggtgcaaatgttgctcggccatgccgatatt
tccaccaccaccatttacacgcacatcgcacgtgaacgtttgaagagcttgcatggtgcg
caccatccgcgtggttga
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