Limnohabitans sp. INBF002: LINBF2_11180
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Entry
LINBF2_11180 CDS
T09962
Symbol
kdsA1
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase 1
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00541
Biosynthesis of various nucleotide sugars
limi01100
Metabolic pathways
limi01250
Biosynthesis of nucleotide sugars
Module
limi_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LINBF2_11180 (kdsA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
limi01005
]
LINBF2_11180 (kdsA1)
Enzymes [BR:
limi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
LINBF2_11180 (kdsA1)
Lipopolysaccharide biosynthesis proteins [BR:
limi01005
]
Lipid A
LINBF2_11180 (kdsA1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
STAS
Motif
Other DBs
NCBI-ProteinID:
BDU52883
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Position
complement(1110795..1111652)
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AA seq
285 aa
AA seq
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MKLCGFDVGLNQPFFLIAGTCSIEGLEMSIEVAGQLKEICSGLGIPLIYKGSFDKANRSS
GSTKRGVGMDAGLKILDEVRRQLHLPILTDVHDESQVKTVASMVDVLQTPAFLCRQTDFI
RAVAQSGKPVNIKKGQFLAPWDMKNVIDKARDAAREAGLPEDNFLACERGVSFGYNNLVA
DMTSLAEMRKSGAPVVFDVTHSVQKPGGQGTVSGGAREMVPVLARAGVAAGVAGLFMETH
PCPSEAWSDGPNAVPLSKMKALLETLVELDAVTKKHPFLENNFEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttgcggattcgacgttggcctcaaccaacctttctttttgatcgcaggcacc
tgctcgatcgaaggcttggaaatgtccattgaggtcgcaggtcaactcaaagaaatctgc
tctggcttgggcattcctttgatctacaaaggttcgttcgacaaagccaaccgctcgtcc
ggcagcaccaagcgcggcgtgggcatggacgcaggtttgaagattcttgacgaagtgcgt
cgccaactgcacctgcccatcctcaccgatgtgcatgacgaatcgcaagtcaaaaccgtg
gccagcatggtcgacgtgttgcaaaccccagccttcctgtgccgccaaaccgacttcatc
cgtgctgtggcgcaatcgggcaagcctgtgaacatcaagaagggccagttcttggcccct
tgggacatgaaaaacgtcatcgacaaagcccgtgacgccgcacgcgaagcgggcctgccc
gaagacaacttcttggcctgcgaacgcggcgtgagctttggctacaacaacctcgtggcc
gacatgaccagcttggctgagatgcgcaagtctggcgcccctgtggtgtttgacgtgacc
cactctgtgcaaaagcccggcggtcaaggcacggtcagtggcggcgctcgtgagatggtg
cctgtgttggcccgtgcaggcgtggccgctggcgtggctggcctgttcatggaaacccac
ccttgcccctcagaggcttggtctgatggcccgaatgccgtgcccttgagcaagatgaaa
gccttgctagaaaccttggtcgagctcgatgccgtgaccaaaaaacaccccttcttagaa
aacaactttgaggcttga
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