Limnohabitans sp. INBF002: LINBF2_11340
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Entry
LINBF2_11340 CDS
T09962
Name
(GenBank) amidase
KO
K02433
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:
6.3.5.6
6.3.5.7
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00970
Aminoacyl-tRNA biosynthesis
limi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LINBF2_11340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
limi03029
]
LINBF2_11340
Enzymes [BR:
limi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
LINBF2_11340
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
LINBF2_11340
Mitochondrial biogenesis [BR:
limi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LINBF2_11340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase
Motif
Other DBs
NCBI-ProteinID:
BDU52899
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All DBs
Position
1127491..1128816
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AA seq
441 aa
AA seq
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MIQTSFDTHTPAAQRVAQALEAAASPAAQHVFTQRYADVARATAEHCDAQTQAGRSLGAL
HGVCITLKDNFDVAGETTMAGGVVCAGEAPAQHDAPVVQRLRDAGAVVLGKTNMSEFAFS
GVGINPHHGTPVNPADPAHARVPGGSSSGAAVSVALGLAEVGIGTDTGGSIRIPAALCGL
VGYKSTQARIPCTGVMELSRTLDTVGSIARSVRACLAVDAVMSQQPLPTDAVNLRGLRFA
VPQTLMMDDVDATVAQAFTRTLRRIAEAGAHVVEIPFNALGDIAALSMPGGFSPIEGYAA
HHARLARGANQIDPRVVARMTLGSGITAQDYLALHNRRHAWIAEAQKTLHGFDAMLCPTV
PMVAPLIEPLLEDDEAFFKVNRLLLRNPSAINYMDGCAWSLPCHEAGELPVGLMVSSLAG
QDAHLARVALALENLMNSLHS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaacgagttttgacacacacacacccgccgcgcaacgcgtggcgcaggcgtta
gaagctgcagccagccccgccgcacaacacgtgttcacgcagcgctacgccgacgtggcg
cgtgccactgccgagcactgtgatgcgcaaacacaagcaggtcgcagcctaggcgcattg
cacggcgtgtgcatcactctcaaagacaatttcgacgtggcgggcgaaaccacgatggcg
ggtggtgtggtgtgtgctggtgaagcgcctgcacagcacgatgcacccgtggtgcaacgc
ttgcgcgatgcaggcgccgtggtgctgggtaaaaccaacatgagtgagtttgctttttcg
ggtgtgggcatcaacccgcaccacggcacgccggtgaaccccgctgacccagcgcatgcg
cgcgtgcccggtgggtcgtcgtcaggtgcggccgtgtcggtcgcgttgggtttggctgag
gtgggcattggcacagacacgggcggctctatccgcatccccgcagctttgtgtggtttg
gtgggctacaaaagcacacaagcgcgcattccctgcacgggtgtgatggagctctcgcgc
acgctagacacggtgggcagcatcgcccgctcggtgcgcgcgtgtttggcggtggacgcg
gtgatgtcgcagcagccattacctacggatgccgtcaacttgcgcggactgcgctttgcc
gtgccgcaaactttgatgatggacgatgtggatgccaccgtggcccaggcctttacacgc
accttgcgccgcattgccgaggcgggcgcacacgtggtggagatacctttcaacgcattg
ggtgacatcgccgcactcagcatgcccggtggcttttcaccgatcgagggctatgccgca
caccacgcacgcttagcgcgtggcgccaaccaaattgacccacgcgtggtggctcgcatg
acgctgggcagtggcattaccgcacaagactacctagcgctgcacaaccgccgccatgcg
tggatagcggaggcccagaaaaccctgcacggttttgatgccatgctgtgccccacggtg
ccgatggtggccccgttgattgagcctttgctcgaagacgatgaggcgtttttcaaagtc
aatcgcttgttgctgcgcaacccatcggccatcaattacatggacggttgcgcttggagt
ttgccctgtcacgaggcgggtgaactgcctgtgggcttgatggtgtcatcccttgcggga
caagacgcgcatctggcgcgcgtggcactggctttggaaaacttaatgaattctttacac
agctag
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