Limnohabitans sp. INBF002: LINBF2_11880
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Entry
LINBF2_11880 CDS
T09962
Name
(GenBank) hypothetical protein
KO
K02656
type IV pilus assembly protein PilF
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
limi02044
]
LINBF2_11880
02035 Bacterial motility proteins [BR:
limi02035
]
LINBF2_11880
Secretion system [BR:
limi02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
LINBF2_11880
Bacterial motility proteins [BR:
limi02035
]
Pilus system
Pilus assembly proteins
LINBF2_11880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_8
TPR_11
TPR_19
TPR_16
TPR_1
TPR_14
ARM_TT21_C
TPR_17
TPR_MalT
TPR_10
TPR_CcmH_CycH
TPR_9
TPR_7
TPR_21
Fis1_TPR_C
CFAP70_mid_TPR
Motif
Other DBs
NCBI-ProteinID:
BDU52953
LinkDB
All DBs
Position
1186445..1186984
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AA seq
179 aa
AA seq
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MNLWRVVTFVVVLIATTCGLAACSAAAPQLDTLTHAEPDGTRQRAMRRLSLASAYYEQNQ
NDVAQQEVRAALQIDPNYADAYSLLGLIHQRAKAPALAQQSFEQALQLASQPPVRSPQLA
AIQHNYGWFLCEQNRFAEAQTQFDRALLQPGYASADKTNKAIEFCKTRAAQTDTRSRNN
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgtggcgtgtcgtgacttttgtggtcgtgttgatcgcgacaacatgtggcttg
gctgcttgcagcgctgctgcgccgcaactagacacgctcacacacgccgagcccgatggc
acgcgccaacgcgcgatgcgccgcctgagtttggccagtgcgtattacgaacaaaaccaa
aacgacgtggcacagcaagaggtgcgcgctgctttgcaaattgaccccaactatgccgat
gcctacagcttgctgggcttgattcaccagcgcgcaaaagcgcctgctttggcgcaacaa
agttttgagcaggccttgcaattggcgtctcaaccgcctgtgcgttcaccccagctagcc
gccattcaacacaactacggttggttcttgtgcgaacaaaaccgtttcgcagaagcgcaa
acgcagtttgaccgtgcgctgctgcagcctggttatgccagcgcagacaaaacaaacaaa
gccattgaattttgcaaaacgcgtgcagcacaaactgacacgcgctcacgcaataattaa
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