Limnohabitans sp. INBF002: LINBF2_11910
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Entry
LINBF2_11910 CDS
T09962
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LINBF2_11910 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
limi01007
]
LINBF2_11910 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limi03016
]
LINBF2_11910 (hisS)
Enzymes [BR:
limi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
LINBF2_11910 (hisS)
Amino acid related enzymes [BR:
limi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LINBF2_11910 (hisS)
Transfer RNA biogenesis [BR:
limi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LINBF2_11910 (hisS)
Prokaryotic type
LINBF2_11910 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
AlaDh_PNT_N
RecD_N
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BDU52956
LinkDB
All DBs
Position
1188952..1190325
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AA seq
457 aa
AA seq
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MTSELTPNHTAEPVKSSKPVKAQALTAVKGMNDLLPPASAQWEWLEDKVRGLMARHAYRN
LRTPIVEPTALFVRGLGEVTDIVEKEMYSFEDRLNGEQLTLRPEATAGVVRAVVEHNMLY
DGGKRLYYMGPMFRHERPQRGRYRQFHQIGAEALGFPGAEVDAELILLAATLWQELGLQD
VRLELNSLGQPNERAAHRTALIAHLEAHADVLDEEAKRRLHSNPLRILDTKNPAMQAVVE
AAPKLIDFLGEASLAHFNAVKAILDASGVAYRINPRLVRGMDYYNLTVFEFVTDRLGSQG
TICGGGRYDYLIEQVGGKPAPAVGWALGVERVLELLKEQGTLPEAVGPDVYAIVPDAAAL
PIVFKTIQTLRAQGMSVQMHAGAGEGMGSMKSQFKKADASGAQFALIFGGDELARGEVTL
KSLRDGAGAQEAVPLVDVTTRVADKLAQSLAQNQTTV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgacttctgaactcactccaaaccacacggccgagcccgtgaaatcaagcaagcccgtc
aaggcccaagccctcactgccgtcaaaggcatgaacgacttgttgcctccagcctccgcc
caatgggaatggctggaagacaaagtgcgcggcttgatggcacgccatgcctaccgcaat
ctgcgcacgcccatcgtcgaacccaccgctttgtttgtgcgtggcttgggcgaggtgacc
gacattgtggaaaaggagatgtactcctttgaagaccgtttgaacggcgagcaactcacg
ctgcgccccgaagccacagcaggcgtggtgcgtgcggtggtcgagcacaacatgctctac
gacggtggcaagcgcctgtactacatgggcccgatgttccgccacgagcgtccccaacgt
ggccgctaccgccagttccaccaaatcggcgcggaggctttgggctttcctggcgcagag
gtggatgccgaactcattttgttggccgccacgctctggcaagagctgggtttgcaagac
gtgcgtttggagctcaacagcttgggtcagcccaatgaacgcgccgcgcaccgcacggcc
ttgattgcgcacttagaagcccacgccgatgtgctggatgaagaagccaagcgccgcttg
cacagcaacccgctgcgcatcttggacaccaagaacccagccatgcaagctgtggtggaa
gccgcgccaaagttgatcgactttttgggcgaagcctcgctggctcacttcaacgcggtc
aaagccattttggatgccagcggtgtggcctaccgcatcaacccgcgcttggtgcgtggc
atggactactacaacctcaccgtgtttgagtttgtgaccgaccgcttgggctcgcaaggc
accatctgtggcggcggccgttacgactacctgatcgagcaagtgggtggcaagcctgca
cccgccgtgggctgggccttgggcgtcgaacgtgtgttggagttgctcaaagagcagggc
acgttgccagaggccgtgggacctgatgtgtacgccatcgttcccgatgcggcggctttg
cctatcgtgttcaaaaccatccaaaccctgcgtgcgcaaggcatgtccgtgcaaatgcat
gcgggggcaggtgaaggcatgggcagcatgaaatcgcagttcaaaaaggccgatgccagc
ggcgcgcaatttgccctcatctttggtggcgacgagttggcccggggcgaagtcaccctc
aagtcgctgcgcgatggcgcaggtgcccaagaggccgtgcccttggtggacgtgacgact
cgcgtggccgataaactggcgcagagcctggcccagaaccaaaccacggtttaa
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