Limnohabitans sp. INBF002: LINBF2_11930
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Entry
LINBF2_11930 CDS
T09962
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limi02000
]
LINBF2_11930 (bamB)
Transporters [BR:
limi02000
]
Other transporters
Pores ion channels [TC:
1
]
LINBF2_11930 (bamB)
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Ortholog
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GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
Beta-prop_EMC1_N
PQQ
Beta-prop_FAM234A_B
Motif
Other DBs
NCBI-ProteinID:
BDU52958
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Position
1191044..1192180
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AA seq
378 aa
AA seq
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MNTTTPSWTHLLRLSLAGVCVALAACSGPSRPKPTEIPGVPVLQDVRTSWTANVGKVDFP
LVVSAREDRIALANSQGVVAVLDAATGKDIWRLKLDQAIAAGVGSDGQQVAVVTRSNELV
VLRDGQVQWRKRLPAQSFTAPLVAGARVFVLTADRSVIAFDGATGHQIWTQQRPGEPLVL
KQAGVMLAFKNTLLVGLSGRLSGLDPNTGVIRWESAIATPRGTNDVERLVDLVSPFDRVG
DVVCVRAFQAAVGCVNAERGQGVWTRPSAGEMGVSGNDTVLIAPLSNGVVQAWSRSTGER
LWETERLKYRILSAPLVTPRGVLLADNGGWLYLLSLADGALLNRIKLDTEELATAPVFAG
GRYVVVTREGRVTGLQIP
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
gtgaacacaacaacgcctagctggacccacctgttgcgcttgagcctagcgggcgtgtgc
gtggccttggccgcttgctctggaccctcgcgccccaaacctaccgaaattccgggcgtg
cctgtgttgcaagacgtgcgcaccagctggacagcgaatgtgggcaaggtggatttcccc
ttggtcgtgtcagcccgtgaagaccgcattgctttggccaatagccaaggtgtggtggcg
gtgctggacgcagcgacaggcaaagacatttggcgcctgaagctggaccaagccatcgcc
gcaggcgtgggcagcgatggccaacaagtagccgtggtgacgcgtagcaatgaattggtc
gttttgcgagatggccaagtgcagtggcgcaagcgcttgcccgcgcagtcgttcaccgca
cctttggtcgctggtgcgcgcgtatttgtgttgaccgccgaccgttctgtcattgccttt
gacggtgcaacaggccatcaaatttggacacagcaacgcccgggtgagcccttggtgctc
aagcaagccggcgtgatgctggcatttaaaaacacgttgttggtcggtttgtctggccgt
ttgtcaggtcttgacccgaacactggcgtgattcgctgggaatctgccattgccacacca
cgtggcaccaatgatgtggaacgcttggttgacttggtcagcccctttgaccgcgtcggt
gatgtggtgtgtgtgcgtgccttccaggctgcagttgggtgtgtgaacgccgaacgcgga
cagggcgtgtggacacgcccctcggcgggtgaaatgggggtgagcggcaacgacacagtg
ctgattgcacctttgtccaacggcgtggtgcaggcatggagccgaagcaccggtgaacgc
ctgtgggaaacagagcgtctgaaataccgcatcttgagcgcacctctggtcacgccgcgt
ggcgtgttgctggcggataacggtggatggttgtaccttctgtcgttggccgatggcgcg
ttgctcaaccgcatcaagctcgacaccgaagaattggcaaccgcccctgtgtttgcaggt
gggcgctatgtggtggtcacacgcgaaggtcgcgtgactggcctccaaatcccgtaa
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