Limnohabitans sp. INBF002: LINBF2_11940
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Entry
LINBF2_11940 CDS
T09962
Symbol
der
Name
(GenBank) GTPase Der
KO
K03977
GTPase
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
limi03009
]
LINBF2_11940 (der)
Ribosome biogenesis [BR:
limi03009
]
Prokaryotic type
GTPases
LINBF2_11940 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
cobW
AAA_22
Roc
Ras
SRPRB
Motif
Other DBs
NCBI-ProteinID:
BDU52959
LinkDB
All DBs
Position
1192204..1193544
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AA seq
446 aa
AA seq
DB search
MKPVLALVGRPNVGKSTLFNRLTKSRDAIVADFAGLTRDRHYGNARFDKHEFIVIDTGGF
EPTADNGIYKEMARQTQQAVAEADVVVFVVDARGGISAQDHDIANYLRRLGKPTILVANK
AEGMKEGAQLVEFYELGLGEVLPVSASHGQGIRDMMAQALAPLNLADPDEEDANADDGII
KLAVAGRPNVGKSTLINTWLGEERLVAFDMPGTTRDAISVPFERNGQMFELIDTAGLRRK
GKVFEAIEKFSVVKTLQAIESANVVLLLLDATQGVTDQDAHIAGYILESGRAVVVAVNKW
DAVDSYQRELLMRSIETRLPFLKFAAMHFISAKKRQGLGPLWGAIAQAHKAAMCKMPTPL
LTRLLLEAVQFQSPQRGGMYRPKLRYAHQGGMNPPIIVIHGNSLEHVTETYKRFLEGRFR
KAFNLEGTPLRIEMKTSSNPYAGKDD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacccgtattggccctggtgggccgccccaacgtcggcaagtccacgttgtttaac
cgcttgaccaaatcgcgtgacgccatcgtggccgacttcgcgggtctgacgcgcgaccgt
cactacggtaatgcccgttttgacaagcacgaattcatcgtcatcgacaccggtggtttt
gaacccactgctgacaatggcatctacaaagagatggcccgtcaaacccagcaagccgtg
gccgaagccgacgtggtggtgtttgtggtggatgcccgtggcggtatttcggcccaagac
cacgacatcgccaactacctgcgtcgcttgggcaagcccacgattttggtggccaacaaa
gccgagggcatgaaagagggcgctcagttggtggagttctacgagctgggcttgggcgaa
gtgttgcccgtgtctgcctcgcatggccaaggcattcgcgacatgatggcgcaagccttg
gcgccgctgaatttggccgacccagacgaagaagacgccaatgccgacgacggcatcatc
aagttggccgtggccggtcgccccaacgtgggcaaatccaccctcatcaacacttggttg
ggcgaagagcgcttggtggcgtttgacatgcctggcaccacgcgtgacgccatcagcgtg
ccgttcgagcgcaacggccagatgtttgaactcatcgacacggctggtttgcgtcgcaaa
ggcaaggtgtttgaagccatcgagaagttctcggtggtcaaaaccctgcaagccattgaa
tcggccaatgtggtactgctcttgctcgacgccacccaaggcgtgaccgaccaagacgca
cacatcgccggctacatcttggaaagcggccgtgctgtggtggtggctgtgaacaaatgg
gatgccgtggattcctaccagcgcgaactgttgatgcgctcgattgagacgcgtttgccg
ttcttgaagtttgcggccatgcacttcatctcggccaagaaacgccaaggcttgggccca
ctgtggggcgccatcgcgcaggcccataaggccgccatgtgcaagatgccaacgcctttg
ctgacccgtttgttgctggaagccgtgcagtttcagtcgcctcagcgcggcggtatgtac
cgtcccaagctgcgttatgcccaccaaggtggcatgaacccgcccatcatcgtgattcac
ggcaactcgctggagcatgtgaccgaaacctacaaacggttcttggaagggcgcttccgc
aaggcctttaatttggaaggtacccccttgcgaattgagatgaagacctcaagtaaccct
tacgcaggcaaagacgactga
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