Limnohabitans sp. INBF002: LINBF2_12170
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Entry
LINBF2_12170 CDS
T09962
Symbol
gntR
Name
(GenBank) GntR family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
limi03000
]
LINBF2_12170 (gntR)
Transcription factors [BR:
limi03000
]
Prokaryotic type
Helix-turn-helix
LacI family
LINBF2_12170 (gntR)
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_31
Motif
Other DBs
NCBI-ProteinID:
BDU52982
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Position
complement(1213909..1214934)
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AA seq
341 aa
AA seq
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MKPTKTRSRATGRVTLADVAALAKVSPITVSRALRGERAVASDLTDRVKAAALKLGYTPD
PAARALASRHSDHVAVLIPMLSNNLFVDVLESIQKTLRHAGYQTLIGITHYDTREEEQLI
REQLQHRPAGILVTGLDRSDAARELIEKSGIPCVHMMELAQSPDVNSVGFSQTQAAMTLT
EHLLQRGRQRIAFAAAQLDPRTMQRLDGWRKTLKAAKLYDKALSYTNKSPSSMALGGEML
QHIMAQDPSIDAIFFCNDDLAQGALLAAQRLKIKVPQQLAIAGFNDLTGSDLVGPGLTTI
RTPRAAIGEAAAKMLLNLMREEDVPTPSVDVGYELMVRGST
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaccaaaacccgttctcgcgccacaggccgcgtcacgctggcggatgtggcc
gctttggccaaggtcagccccatcaccgtgtcgcgtgcgttacgcggtgaacgtgcggtg
gcctctgatttgaccgaccgcgtcaaagccgccgctttgaaactgggctacacccccgat
cccgccgcacgcgccctcgcctcgcgccacagcgaccacgtggcggtgttgattccgatg
ctgtccaacaacttgtttgtggacgtgttggagtccatccaaaaaacactgcgccatgcg
ggctaccaaaccttgattggcatcacccactacgacacgcgcgaagaagaacaactcata
cgcgaacaattgcagcaccgccctgcaggtatcttggtcacaggcctagaccgcagcgat
gcggcacgtgagctgattgaaaaaagtggcattccgtgtgtgcacatgatggagctcgcc
caatcgcctgatgtcaacagtgtggggttctcacaaacacaagcggccatgacgttgacc
gagcatttgctgcaacgtggacgccaacgcattgcctttgcagcggcccaactcgaccca
cgcaccatgcagcgcttggacggttggcgcaaaacgctcaaggcggccaagctgtatgac
aaggccttgagctacaccaacaaatcgccgtcatccatggctttgggtggtgagatgctg
caacacatcatggcccaagaccccagcattgacgccatcttcttctgtaacgatgacttg
gcccaaggcgcgttgttggcagctcaacgcttgaaaatcaaagtccctcagcagctcgcg
attgcaggtttcaacgacctcacaggcagcgatctcgttggcccaggcctgaccaccatc
cgcacgccacgggccgcaattggtgaagccgcagccaagatgctgctgaacctgatgcgt
gaagaggatgtgcctacgcccagcgtggacgtaggctacgaactgatggtgcgcggcagc
acctga
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