Limnohabitans sp. INBF002: LINBF2_12300
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Entry
LINBF2_12300 CDS
T09962
Name
(GenBank) transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
limi03000
]
LINBF2_12300
Transcription factors [BR:
limi03000
]
Prokaryotic type
Helix-turn-helix
Other families
LINBF2_12300
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_IclR
LacI
HTH_AsnC-type
HTH_Crp_2
MarR
TetR_N
PP2C_2
Motif
Other DBs
NCBI-ProteinID:
BDU52995
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Position
complement(1230191..1231039)
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AA seq
282 aa
AA seq
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MLERIKSTLSSLAPAEQRVGKLLLSDPRTFSTLPVTELAERAGVSKPTVVRFCRSMGYEG
LSDFKLKLAGSLSEGVPFIHRNVGAQDNSNDVLVKVIDNTVTAFLKYRNDASSAAIDKAA
EAIALTHKKGKRLEFFGVGNSGIVAQDAQHKFFRLGFHTISHSDGHMQIMSASLLGPGDC
LVVFSNSGRTRDLLDSCEIAKKNGATTVVVTASGSPLANAGKIHLAADHPESYEKFSPMV
SRLLHLMIVDVLATTVALRIGSTQLQPLLRNMKQNLLNKRYS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacgtatcaaatcgaccctttcgtccttagcccccgccgaacagcgcgtgggc
aagcttcttctctctgacccacgcactttttcgaccctgcccgtcaccgaactggccgaa
cgtgcaggcgtgagcaaaccgaccgtggtgcgcttttgccgcagcatgggctacgaaggt
ttgagtgatttcaagctcaagctcgctggcagcttgagcgaaggtgtgcccttcatccac
cgcaacgtgggcgcacaagacaacagcaacgatgtgttggtcaaagtcattgacaacacc
gtcaccgcgtttttgaaataccgcaacgatgcgtcatccgccgccatcgacaaagccgcc
gaagccatcgccctcacccacaaaaaaggcaaacgccttgagttttttggtgtgggcaat
tcaggcatcgtggcgcaagacgcacagcacaaatttttccgtctgggtttccacaccatc
tcgcacagcgacggccacatgcaaatcatgagcgcttctttgctcggccctggcgactgc
ttggtggtgttctctaactctggccgcacacgcgatttgctcgactcatgcgagattgcc
aaaaagaacggggccaccaccgtggtggtcaccgcctctggctcacctctggccaacgcc
ggaaaaattcacctcgcagcggaccaccccgaaagctacgaaaaattcagccccatggtg
tcgcgcttgctgcacctgatgatcgtcgacgtgttggccaccaccgtggcactgcgcata
ggcagcacacagctgcaacctttgctgcgcaacatgaaacaaaaccttcttaacaaacgt
tactcatga
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