Limnohabitans sp. INBF002: LINBF2_12550
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Entry
LINBF2_12550 CDS
T09962
Symbol
ldcA
Name
(GenBank) muramoyltetrapeptide carboxypeptidase
KO
K01297
muramoyltetrapeptide carboxypeptidase [EC:
3.4.17.13
]
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
limi01002
]
LINBF2_12550 (ldcA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
limi01011
]
LINBF2_12550 (ldcA)
Enzymes [BR:
limi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.13 muramoyltetrapeptide carboxypeptidase
LINBF2_12550 (ldcA)
Peptidases and inhibitors [BR:
limi01002
]
Serine peptidases
Family S66
LINBF2_12550 (ldcA)
Peptidoglycan biosynthesis and degradation proteins [BR:
limi01011
]
Precursor biosynthesis
Carboxypeptidase
LINBF2_12550 (ldcA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S66C
Peptidase_S66
Motif
Other DBs
NCBI-ProteinID:
BDU53020
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All DBs
Position
1254862..1255791
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AA seq
309 aa
AA seq
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MAHIYIYSPSGAVRDKAAFKRGVARLKKLGHEVELDADALSSHTRFAGDDATRLAAIHRA
ADSGANVALISRGGYGLTRILPGIKYKQVAKAIAKGTQFVGLSDFTAFQNALLAKTGAVT
WAGPALGEDFGAEQPDDIMEACFDDMVSGQGEGAGWHFSTACATANAKRRPGVWAHDAVL
WGGNLAVLVSLLGTPYFPHIKNGVLFLEDVGEHPYRIERMLTQLLHAGVLAQQKAIVLGQ
FNNYKLTPHDKGFKLQSVIDWLRTQIKAPVLTDLPFGHVPTKLCLPLGQKIDLVVEDRDA
LLLWAHTDH
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcccacatttacatctattcccccagcggcgcggtgcgcgacaaagcagctttcaaa
cgaggcgtcgcacgcctgaaaaaactcggtcacgaggtcgaactcgatgcagacgcactc
agcagccacacccgttttgccggtgacgatgccacccgcttggcggccattcaccgcgca
gcagacagcggcgccaatgtggccttgatttctcgtggcggctacggcctcacacgcatc
ttgcccggcattaaatacaagcaagtggccaaagccattgccaaaggcacgcagtttgtg
ggcttgagcgacttcacggctttccaaaacgcactattggcgaaaactggtgccgtcact
tgggctggccctgcattgggtgaagactttggtgcagaacaacccgacgacatcatggaa
gcctgttttgacgacatggtcagcgggcagggtgagggcgcgggttggcatttctctacc
gcgtgcgccacggccaacgccaagcgccgccccggcgtgtgggcgcacgatgcggtgctg
tggggtggtaacttggctgtgttggtttctttgctcggcacgccctatttcccgcacatc
aaaaacggcgtgttgtttcttgaggatgtgggcgaacacccataccgcattgagcgcatg
ctcacgcagttgttgcacgccggtgtgttggcccagcaaaaagcaattgtgttgggccaa
ttcaacaattacaaactcacgccgcacgacaaaggcttcaagctgcaaagcgtgatcgat
tggttgcgcacgcagatcaaagcgccggtgttgaccgatttgccgttcgggcacgtgcca
accaagctgtgcttgcctctgggccaaaagattgatctggtcgtggaagaccgtgatgcg
ttgctgctttgggcgcatacagaccattaa
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