Limnohabitans sp. INBF002: LINBF2_12680
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Entry
LINBF2_12680 CDS
T09962
Symbol
tex
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LINBF2_12680 (tex)
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GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
HHH_6
S1_RRP5
DUF460
T2SSK
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
BDU53033
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Position
complement(1265260..1267632)
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AA seq
790 aa
AA seq
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MQKITRQLADEIKISEAQVRSAVELLDGGATVPFIARYRKEVTGGLDDIQLRELEARLSY
LRELEDRRAAVIKSIQEQGKLTPELLAAIEAAPTKQELEDIYLPFKPKRRTKGMIAKEAG
LEPLADKLFADPALNPNVEAEAFILPAGKIEGADFSSVAAVLDGVRDLLSERWAEDAVLV
QSLREWLWTEGLFRSKLAAGKDENNPDVAKFRDYFDYDEPVGRVPSHRALAVFRGRALEM
LDAKLVLPVEPEPGKPSLAEGKIALHLGWSHSSRAGDDLIRKCVAWTWRVKLSLSTERDL
FTRLREEAEKVAIKVFADNLRDLLLAAPAGPRVVMGLDPGIRTGVKVAVVDATGKLVETS
TVYPHEPRKDWDGSLYTLAKLAEKHGVNLIAIGNGTASRETDKLAGEVIKLMSKHDASKV
IDKVVVSEAGASVYSASEYASQEMPDVDVSLRGAASIARRLQDPLAELVKIDPKSIGVGQ
YQHDVNQSELARTLEAVVEDCVNKVGVDLNTASVPLLTRVSGLSTTTAKAVVRWREANGA
FANRQQLLKVTGLGAKTFEQSAGFLRIRDGDNPLDMTAVHPETYPVVERIMAQTGKPVAE
LMGRADMLKTLKPELFANDTVGVITVKDILSELEKPGRDPRPDFKVAKLQDGVEDIKDLK
VDMVLEGTVSNVAAFGAFVDLGVHQDGLIHVSQLSNKFITDAREVVKTGDIIKVKVLEVD
VARKRISLTMKMDGAPAKRDGPRDNRFEHAGRDNRQRGGGGYSSGYTAPPQAAAGSAMAS
AFAKLQGLKK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaattacccgccaactggcggacgaaatcaagatttccgaagcccaagtgcgc
tctgctgttgagctgctcgatggtggtgcgaccgtgccctttattgcgcgttaccggaaa
gaagtcacgggcggcttggacgacattcaattgcgcgaactcgaagcccgcctgagctac
ctgcgcgagctagaagaccgacgcgccgccgtcatcaagagcattcaagaacaaggcaag
ctcacgcccgagttgctggccgccatcgaagccgcgcccaccaagcaagagctggaagac
atttacttgcccttcaagcccaagcgtcgcaccaagggcatgattgccaaagaagcgggc
ttggagccactggcagacaagctgtttgccgaccctgcgctgaaccccaatgtggaagcc
gaagcgttcatcttgcccgcaggcaagattgaaggggccgacttctcatcagtggctgct
gtactcgacggcgtgcgcgacttgttgagcgagcgctgggccgaagacgccgttttggtg
caaagcttgcgcgaatggctctggaccgaaggcttgttccgcagcaagctcgccgctggt
aaagacgaaaacaacccagatgtggcgaagtttcgcgactactttgattacgacgagcct
gtgggccgcgtgccctcgcaccgcgccttggccgtgttccgtggccgtgcgctggaaatg
ctcgatgccaagctcgttctccccgtcgagccagaacccggtaagcccagcttggccgaa
ggcaagattgccttgcacctcggctggagccattccagcagggcaggggacgacctgatt
cgcaaatgcgtggcgtggacatggcgtgtgaagctgagcctatccaccgagcgcgacttg
ttcacgcgtctgcgcgaagaggccgaaaaagtcgccatcaaagtgtttgccgacaacttg
cgcgacttgctgctggctgcacccgctggcccgcgcgtggtgatgggcctcgacccaggc
attcgcaccggcgtgaaagtggccgtggtcgatgccactggcaagctggtggaaacgtcc
accgtttacccgcacgagccccgcaaagactgggacggttcgctctacaccttggccaag
ctggccgagaaacacggcgtgaacttgattgccattggcaacggcactgccagtcgcgag
accgacaaactggcaggcgaagtcatcaaactcatgtccaaacatgacgcgtcaaaagtc
atcgacaaagtggtggtcagcgaagcgggcgcgtcggtgtacagcgccagtgaatacgcc
agccaagaaatgcctgatgtggatgtgagcctgcgcggcgcggccagcattgcgcgccgc
ttgcaagaccccttggccgagctggtgaagatcgaccccaaatccatcggcgtgggccag
taccaacacgatgtgaaccaaagcgaactcgcccgcaccctcgaagccgtggtggaagac
tgcgtgaacaaagtgggggttgacctgaacaccgccagcgtgcccttactcacgcgcgtg
tctggcttgagcaccaccaccgccaaagccgtggtgcgttggcgcgaagccaatggtgcg
tttgccaaccgtcagcagttgctcaaagtcaccggcctcggcgcgaaaacgtttgagcaa
agcgcgggcttcttgcgcattcgtgatggcgacaacccgttggacatgactgcggtgcac
cccgaaacctacccagtggtcgagcgcatcatggcgcaaactggcaagcccgtggccgag
ctgatgggccgcgctgacatgctcaaaaccttgaagcccgagctgtttgccaacgacacc
gtgggcgtcatcaccgtcaaagacatcttgagcgaactcgaaaagccaggccgcgacccg
cgccccgacttcaaagtggccaagctgcaagacggcgtagaagacatcaaagacctgaag
gtcgacatggtgctcgaaggtaccgtcagcaacgtggccgcctttggcgcgtttgtcgac
ttgggcgtgcaccaagacggcttgattcacgtcagccaactcagcaacaagttcatcacc
gacgcccgcgaagtggtgaagaccggcgacatcatcaaggtcaaagtgctggaagtggac
gtggcccgcaaacgcatcagcctcaccatgaaaatggatggcgcgcctgccaagcgcgat
ggaccacgcgacaaccgctttgagcatgctgggcgcgacaaccgccagcgcggtggcggc
ggctacagcagtggctacaccgcgccaccacaagcggcagcgggctcggccatggcgagt
gcatttgccaagctgcaaggtttgaagaagtaa
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