Limnohabitans sp. INBF002: LINBF2_12940
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Entry
LINBF2_12940 CDS
T09962
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
limi03012
]
LINBF2_12940
Translation factors [BR:
limi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
LINBF2_12940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
ABC_tran_CTD
SMC_N
ATP-synt_ab
AAA_29
AAA_23
RsgA_GTPase
MMR_HSR1
MeaB
NB-ARC
NACHT
RNA_helicase
AAA_16
DUF87
Motif
Other DBs
NCBI-ProteinID:
BDU53059
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All DBs
Position
1300125..1302173
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AA seq
682 aa
AA seq
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MITIKNVTLRRSAKVLLEGATVTLNPGEKVGLVGRNGAGKSSLFALLNGNLQEDTGEFYI
PTQWRMGQVSQDMPETEQSATEFVIEGDTVLNDARAEVAAAETTDDGERLGNAYMALYDA
GEHDAQSRAQALILGLGFKTTELDNPVNSFSGGWRMRLQLARALMCPSDLLLLDEPTNHL
DLDALVWLEAWLKRYEGTMVVISHDREFLDAVTNVTLHIDAGKLVRYGGNYSKFEDMRAE
QMELQQNAFAKQQDKIAHLQKFIARFKAKASKAKQAQSRVKALDRMEKIAPLLADADFSF
EFKEPANLPNPMLSMQGVSVGYPAPVDAPAGTPPTVIVHNVSRSVLAGQRIGILGANGQG
KSTLVKTIARDLQAIGGEVTEGKGLNIGYFAQQELDVLHPADNPLDHMIALAKKLTIDGK
LAGQATREQDLRSFLGQFNFGGDMVKQAVGSMSGGEKARLVLCMLVWQRPNLLLMDEPTN
HLDLATREALSMALNEFEGTVMLVSHDRALLRAVCDEFWMVSRGGVEPFDGDLDDYQRYL
LDEGKRLRAEAVAAANAAALKPAVVAPVAQVAAPVVQAAAPAAKTAAPMASRDQRKEDAQ
LRKDINEKKRPLKKEMDGVEKTMATLESEKTALHDKLATPLPPAEIAEAGKRLKAVEDEL
AELEVRWLELTEAMDAIEAAMA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgattaaaaatgtcaccttgcgccgcagtgccaaggtgttgctagaaggcgcc
accgtcacccttaaccccggtgaaaaagtaggcttggtgggccgtaacggcgcgggtaaa
tcgtcgctgtttgctttgctcaatggcaacttgcaagaagacaccggtgagttttacatc
cccacgcaatggcgcatgggccaagtgtcccaagacatgccagagaccgagcaaagcgcc
accgagttcgtgattgaaggcgacaccgtgctgaacgatgcacgcgccgaagtggccgca
gcagaaaccaccgacgacggcgagcgtttgggcaacgcctacatggcgctgtacgacgca
ggcgagcacgatgcgcagtcacgcgcacaagcgctcatcttgggtctgggctttaaaacc
accgagctcgacaaccctgtgaacagcttctccggcggctggcgcatgcgcttgcaattg
gcgcgcgcgctgatgtgcccgtctgatttgctgctgcttgacgaacccaccaaccacttg
gacttggacgcgttggtgtggctggaagcgtggctcaagcgctacgaaggcacgatggtg
gtcatcagccatgaccgcgaatttttggatgcggtgaccaacgtcaccctgcacatcgac
gcaggcaagctggtgcgctacggcggcaactacagcaagtttgaagacatgcgtgctgag
caaatggagctgcaacaaaacgcctttgccaaacagcaagacaagattgcgcatttgcaa
aagttcattgcacgcttcaaggccaaggccagcaaagccaagcaagcgcagagccgcgtc
aaggctttggaccgcatggaaaaaattgcgccgttgttggccgacgccgacttcagcttt
gaattcaaagaacccgccaacttgcccaaccccatgctgagcatgcaaggcgtgagcgtg
ggctaccccgcgcctgtcgacgcacctgcgggcaccccacccacggtcatcgttcacaac
gtcagccgctcggtgctggccggtcagcgcattggcatcttgggtgccaacggccaaggt
aaatccacgttggtcaaaaccatcgcacgtgatttgcaagccattggcggtgaagtgacc
gaaggcaagggcctgaacatcggctactttgcgcagcaagaactcgacgtgttgcacccc
gcagacaacccgcttgaccacatgattgcgttggcgaaaaaactcaccatcgacggcaaa
ctggctggccaagccacgcgcgagcaagacttgcgcagcttcttgggccaattcaacttt
ggcggcgacatggtcaagcaagccgtgggcagcatgagcggcggcgaaaaagcccgtctc
gtgctgtgcatgttggtgtggcaacgccccaacctcttgctgatggacgagcccaccaac
cacttggacctcgccacccgcgaagcgctgagcatggcgctgaacgaatttgaaggcacc
gtgatgctggtcagccatgaccgtgcgttgttgcgtgcggtgtgtgacgagttctggatg
gtgtcacgcggcggcgtggagccgtttgatggcgacttggacgactaccaacgctacctg
ctcgacgaaggcaaacgcctacgtgcagaggcagtggccgctgccaatgcggcggcgctc
aagcctgccgttgtggcgccagtggctcaagttgcagcgcctgttgtgcaagcggctgcg
cctgcagcgaagacggctgcgcctatggcttctcgtgaccaacgcaaagaagatgcacag
ctgcgcaaagacatcaacgagaaaaaacgtccgttgaaaaaagagatggatggcgtggag
aaaaccatggccacgctcgagtctgaaaagacggcgttgcacgacaaactcgccacaccc
ctgccccctgctgaaattgccgaagccggcaagcgcctcaaagcggtggaagacgaattg
gccgagctagaagtgcgttggctagagctgactgaggcgatggatgcgatagaagctgcg
atggcttaa
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