Limnohabitans sp. INBF002: LINBF2_13300
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Entry
LINBF2_13300 CDS
T09962
Symbol
msbA
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LINBF2_13300 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limi02000
]
LINBF2_13300 (msbA)
Enzymes [BR:
limi01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LINBF2_13300 (msbA)
Transporters [BR:
limi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LINBF2_13300 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
ABC_ATPase
AAA
AAA_24
RsgA_GTPase
AAA_5
AAA_29
Mg_chelatase
AAA_25
AAA_18
DEAD
NACHT
Zeta_toxin
nSTAND3
AAA_33
APS_kinase
6PF2K
Septin
AAA_28
TsaE
Motif
Other DBs
NCBI-ProteinID:
BDU53095
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Position
1347284..1349080
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AA seq
598 aa
AA seq
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MTTTAPSTPSDSLYQRLKRVAPWFAGHPGALVLGIVGIFVGAATEPAIPAMMKPLLDSGF
DRGTLELWKIPLVLLLLFGVRGFAGFIAAYCLARVTNYSMEKLRQRLFEKLLRADSQLFA
TQHTSGLTNTMVYEVNNGASLLVTTMLAFAKDLVTLLALLGYLLVLNWKLTLIVFAIFPP
IAWVVKNLSRRLDNVTRASQDATDELAYVVEENVLAYRMVRLHNAQGSQTHKFGSSNQKL
RQLALKAVVANSVMTPLIQMFAALALSAVIMVALYQSTGDGATQGVTVGSFAAFITGMLM
LISPIKHLSEVAGTLTRGVTSLERGLNLLELAPDETQGTHTSDHAQGEICFDHVTLQYPS
ATAPALNSVSLTIHPGQTVALVGPSGSGKTTLANLLPRFLDPTTGQVRLDGVPLKDWSLA
SLRRQVAYVSQDVVMFNDTVAQNIALGETVDTARVWSALEAANLGDFVRSLPSQENTLVG
HNATQLSGGQRQRLAIARAIYKDAPILILDEATSALDTTSEQAVKDALNVLMQGRTSLVI
AHRLSTIEHADLIVVMQAGSIVETGTHSQLMAQGGAYAALYHVAAQSTDNHFSDSQSI
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccgccccatcgaccccgtctgactccttgtaccaaaggctcaaacgcgtg
gccccgtggtttgcaggtcatcctggcgcgctggtgttgggcattgtgggcatttttgta
ggcgccgccaccgagcccgccattcccgccatgatgaaacccctgctggacagcggtttt
gaccgtggcaccttagagctgtggaagattcccctcgttttgctgttgttgtttggtgtg
cgcggctttgcgggttttattgcggcctattgcctggcccgtgtgaccaactattcgatg
gaaaagttgcgccaacgcctgtttgagaagctgttgcgcgctgattcccagctgtttgcc
acccagcacaccagcggcttgaccaacaccatggtctatgaagtgaacaacggcgcttcg
ctgctggtgaccaccatgctggcatttgccaaagatttggtcaccctgctcgccttgctc
ggctacttgttggtcctcaattggaaactcaccctgattgtgtttgccatcttcccgccc
atcgcttgggtggtgaaaaacctgtcgcgccgcctcgacaacgtgacccgcgccagccaa
gacgccaccgacgagctggcctatgtggtggaagaaaacgtgctggcctaccgcatggtg
cgcttgcacaacgcacaaggcagccaaacccacaagttcggcagctccaaccaaaaactg
cgccagctggctctgaaagccgttgtcgccaactcggtgatgaccccgctcatccaaatg
tttgcggccttggcgctgtccgccgtcatcatggtggcgctgtaccaaagcacgggcgat
ggcgcaacccaaggcgtgaccgtgggcagctttgctgccttcatcaccggcatgttgatg
ctgatttcgcccatcaaacacctgtctgaagtggcgggcacgctcacacgtggcgtcacc
tctctggagcgcggcttgaacctgctcgagctcgccccggacgaaacccaaggcacacac
accagcgaccacgcccaaggcgaaatttgctttgaccacgtcacgctgcaatacccgtct
gccaccgcacctgccctcaacagcgtgagcctgaccatccaccccggccaaactgtggcc
ttggtcggtccatccggctctggcaaaaccaccttggccaacctgttgccgcgcttcctt
gaccccaccacgggccaagtgcgcttagacggcgtaccgctcaaagactggtcgctggcc
agcttgcgccgccaagtggcctatgtgagccaagacgtggtcatgttcaacgacaccgtg
gcccaaaacatcgccttgggcgaaaccgtggacacagcccgtgtgtggagcgccctagaa
gccgccaacctcggtgactttgtgcgcagcctgccgagccaagaaaacacgctggtcggc
cacaacgccacccagctctcaggcggccaacgccagcgcttggccattgcccgcgccatc
tacaaagacgcgcccatcctgatcttggacgaagccacgtcggccttggacaccacctct
gagcaagccgtcaaagatgcgctgaatgtgctcatgcaaggccgcacgtctctggtcatc
gcccaccgcctgtccaccattgagcatgccgacctgatcgtggtcatgcaagccggcagc
attgtggagaccggcacgcacagccaactcatggcccaaggcggcgcgtatgcagcgctg
taccacgtggctgcgcaaagcaccgacaaccatttctctgactcacaaagcatctga
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