Limnohabitans sp. INBF002: LINBF2_13410
Help
Entry
LINBF2_13410 CDS
T09962
Name
(GenBank) ATP-binding protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limi03400
]
LINBF2_13410
DNA repair and recombination proteins [BR:
limi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
LINBF2_13410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
AAA_22
DUF87
AAA_10
FtsK_SpoIIIE
T2SSE
TrwB_AAD_bind
ResIII
AAA_30
AAA_16
AAA_19
AAA_7
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BDU53106
LinkDB
All DBs
Position
1357728..1359272
Genome browser
AA seq
514 aa
AA seq
DB search
MAEPMLIALHKTTECHMLPALANRHGLVTGATGTGKTVTLQTLAEGFSKIGVPVFMADVK
GDLAGISQPGTIPSKLAASLQERGVPMPEPIACPTTLWDVFGKSGHPVRATITDMGPLLL
GRMLNLNDTQSGVLNMVFKIADDQGLLLLDLKDLRAMLQHVGEHARDFTTEYGNVSAASI
GAIQRALLEIEAQGGDAFFGEPMLNIQDFIQTDAKGMGVINLLAADKLMNAPRLYGTFLL
WMLSELFEQLPEVGDVEKPKMVFFFDEAHLLFNEAPKVLLERIELLVRLIRSKGVGVYFV
TQNPLDVPETVLGQLGNRVQHALRAFTPRDQKAVKATAQTMRGKAGLDIEKAITELGVGE
ALVSLLDAKGRPSETEQVYVLLPGSQLGPITPEQRQALLANSLVAGVYEQTLDRESAYER
LKGATPASTNSATGNAAGASAGSGAFGQAAAPSMTDQVLSGLGEALFGSTGPRGGQHQGL
AQVMVKSAVRNIGSAVGREIVRGVMGSILGGRKR
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccaatgctgattgcgctgcataagactaccgaatgccacatgctgccggca
ctcgccaaccgccacggcctcgtcacaggcgccaccggcacaggcaaaactgtcacgctg
caaacgctggctgaaggcttctccaaaatcggcgtgcctgtgttcatggccgacgtcaaa
ggcgatttggcgggcatcagccagcccggcaccattccttccaaattagccgcctcgctg
caagagcgcggtgtgcccatgccagagcccatcgcctgccccactaccctttgggatgtg
tttggcaaatcgggccaccccgtgcgcgccaccatcaccgacatggggccgctgttgctg
ggccgcatgctcaacctgaacgacacgcaatccggcgtgctgaacatggtgttcaaaatt
gcggacgaccaaggcttgctgctgctcgacctcaaagacctgcgcgccatgctgcaacac
gtgggcgaacacgcccgcgacttcaccaccgagtacggcaacgtcagcgccgccagcatt
ggcgccattcaacgcgccttgctagagattgaagcccaaggtggcgatgccttttttggc
gagcccatgctcaacatccaagacttcatccaaaccgatgccaaaggcatgggcgtgatc
aacctcttggcggcagacaaactgatgaatgccccgcgcctctacggcacgtttttgctg
tggatgctctccgagctgtttgagcaattgcctgaggtgggtgatgtggaaaagcccaag
atggtgttcttctttgacgaagcgcatttgctgttcaacgaagcgcccaaggtgctgctg
gaacgcattgagctgctggtgcgcctgattcgctccaagggcgtgggcgtgtactttgtc
acccaaaacccgctggacgtgcccgaaaccgtgctgggccagctgggcaaccgcgtacaa
cacgctttgcgcgccttcaccccacgcgaccaaaaagccgtcaaagccaccgcgcaaacg
atgcgcggcaaagcgggcctcgacattgaaaaagccatcaccgagctaggcgtgggcgaa
gccttggtcagcctgctggacgccaaaggccgtccgtctgaaactgaacaggtgtatgtg
cttttgcccggcagccaactcggccccatcacgcccgagcaacgccaagccttgctggcg
aactcgttggtggctggggtgtatgagcagaccttggaccgtgaatcggcgtatgagcgc
ctgaaaggtgcgacgccagccagcaccaacagcgcgacgggcaatgcggcaggtgcaagc
gcaggttcaggtgcgtttggccaagccgccgcgccctcgatgaccgatcaagtgctgtct
ggcttgggcgaagccctgtttggctccactggcccacgcggcggtcagcaccaagggttg
gcgcaagtcatggtcaagtccgccgtgcgcaacattggctcagctgtgggccgcgagatt
gtgcgtggcgtgatgggcagcatcttgggtggccgcaagcgctga
DBGET
integrated database retrieval system
