Limnohabitans sp. INBF002: LINBF2_13600
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Entry
LINBF2_13600 CDS
T09962
Name
(GenBank) transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi02020
Two-component system
limi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LINBF2_13600
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LINBF2_13600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
limi03000
]
LINBF2_13600
Transcription factors [BR:
limi03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
LINBF2_13600
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Ortholog
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GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
GntR
HTH_24
HVO_2718
HTH_3
Motif
Other DBs
NCBI-ProteinID:
BDU53125
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Position
1374908..1375627
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AA seq
239 aa
AA seq
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MDDPILNIEEREAINAGRWFSSLSPSLRHDILRCAYVKRCKDSDLIAARGDPAEEWMACA
RGAVRVSSTSLSGKQITFTYVEPGIWFGDVAILDGDRRTHDVYAHGETTILCVAKADFQK
ILSQHVEFYEAMLRLQARRIRQLFGLVEDLNTLPLRSRLAKQLLHLARSYGVQSLTNAQE
IRIGLHLAQEELAQLLGASRQRVNQELKAMEREEAIRIEPGGLVIRNRDALLHISEADH
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcctattcttaacatcgaagaacgcgaggccatcaacgcaggacgttggttc
tcatctctttcaccttcactcaggcacgacattcttcgatgcgcttacgtcaaacgatgc
aaagacagcgacttgattgcagctcgcggcgatccggccgaagaatggatggcctgcgcg
cgtggcgcggtgcgcgtgagctcaacctcgttgtcgggcaagcagatcaccttcacgtat
gtggagcctggcatatggtttggcgacgtggcgatcctggacggggaccgtcgcacgcac
gatgtgtacgcccacggcgagaccaccattctttgcgtggccaaggcagactttcaaaaa
attctcagccagcatgtggagttctacgaagccatgctgcgcttgcaagcacgccgcatt
cgccaactgtttggtttggtggaagacctcaacaccctgcccttgcgctcgcgcttggcc
aaacaactgctgcacttggcacgcagctacggtgtgcagagtctgaccaacgcacaagag
attcgcattggtttgcatctggcgcaagaagaattggcgcaactcttgggtgcctcacgc
caacgtgtgaaccaagaactcaaagccatggaacgcgaggaagccattcgcatcgagccg
ggcggcttggtgattcgcaaccgcgacgctttgctacacatcagcgaagccgaccactga
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