Limnohabitans sp. INBF002: LINBF2_13780
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Entry
LINBF2_13780 CDS
T09962
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
limi03021
]
LINBF2_13780 (nusA)
03009 Ribosome biogenesis [BR:
limi03009
]
LINBF2_13780 (nusA)
Transcription machinery [BR:
limi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LINBF2_13780 (nusA)
Ribosome biogenesis [BR:
limi03009
]
Prokaryotic type
rRNA transcription factors
LINBF2_13780 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
KH_1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
BDU53143
LinkDB
All DBs
Position
complement(1395560..1397044)
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AA seq
494 aa
AA seq
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MNREMLMLVEAISREKNVERDVVFGAVELALAQATKKLYEGDVDIRVAMDRDTGEYETFR
RWLVVPDEAGLQNPEAEEMLMDARERVADVEEGEYIEEGVESLPIGRIGAMAAKQVILQK
IRDAEREMLLNDFMSRGDKIFVGTVKRMDKGDLIVESGRVEGRLRRSEMIPKENFRSGDR
VRAMIMEVDLTLRGAPIILSRSAPEFMVELFRHEVPEIEQGMLEIKSCARDAGSRAKIAV
ISHDKRVDPIGTCVGVRGTRVNAVTTELAGERVDIVLWSEDPAQFVIGALAPANVSSIVV
DEERHAMDVVVDEENLAIAIGRGGQNVRLAAELTGWKINIMDAAESAQKQADETFSIREL
FMAKLDVDQEVADILIEEGFTSLEEVAYVPLQEMLEIESFDEDTVNELRTRAKDALLTME
IAREESVEEVSQDLRDLEGLNAEFLPQLAESGVHTRDDLADLAVDELTAITGQSEEEAKA
LILKAREHWFTGQE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgaaatgttgatgttggtcgaggcaatctcgcgcgagaaaaacgtcgaacgc
gatgtggtgtttggcgccgtcgagttggcgttggcccaagccaccaaaaagctgtacgaa
ggtgatgtggacattcgcgtggcgatggaccgtgacacaggcgagtacgaaactttccgc
cgttggttggtggtgcctgacgaagctggtttgcaaaaccctgaagccgaagaaatgttg
atggacgcccgcgagcgcgtggctgacgtcgaagaaggtgaatacatcgaagagggcgtc
gagtccttgcccatcggtcgcatcggtgcaatggctgccaagcaagtgatcttgcaaaaa
atccgcgacgctgagcgcgagatgttgctcaacgacttcatgtcccgcggcgacaagatt
tttgtcggcacggtcaagcgcatggataagggcgacctcattgtcgaatccggtcgcgtg
gaaggccgtttgcgtcgcagcgaaatgatccctaaagaaaacttccgcagtggtgaccgt
gtgcgcgccatgatcatggaagtggacttgactttgcgcggtgcgcccatcatcttgtcg
cgttcggcgcctgagttcatggtggagttgttccgccacgaagtgccagaaatcgaacaa
ggcatgctcgagatcaaatcttgcgcccgtgacgcgggttcacgcgccaagatcgccgtc
atctctcacgacaaacgcgttgaccccatcggtacttgcgtgggcgtgcgtggcacccgc
gtgaacgcggtgaccaccgagctcgccggcgaacgcgtggacatcgtgttgtggagcgaa
gatccagcccaattcgtgattggtgctttggcgcctgccaacgtcagctccatcgtggtg
gacgaagagcgtcacgccatggatgtggtggtggacgaagaaaacctcgccatcgccatc
ggccgtggcggccaaaacgtgcgtttggcggctgagttgaccggctggaaaatcaacatc
atggatgccgctgagtctgctcagaagcaagctgacgaaacgttcagcatccgtgaattg
ttcatggccaagttggacgtggaccaagaagtcgctgacatcttgattgaagaaggtttc
accagcctcgaagaagtggcttatgtgccattgcaagagatgttggaaatcgaaagtttt
gacgaagacaccgtcaacgagttgcgcacacgtgccaaggatgcgctgctcaccatggaa
attgcacgcgaagagagcgtcgaagaagtttcgcaagatttgcgcgacctcgaaggattg
aatgcggagttcttgccccagttggctgagagcggcgtacacacccgtgacgatttggcc
gatttggccgtagacgagctcacagccatcaccggccaaagcgaagaagaggccaaagcc
ctgatcttgaaggcacgtgaacattggttcacgggtcaagagtaa
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