Limnohabitans sp. INBF002: LINBF2_13860
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Entry
LINBF2_13860 CDS
T09962
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00330
Arginine and proline metabolism
limi01100
Metabolic pathways
limi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LINBF2_13860
Enzymes [BR:
limi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
LINBF2_13860
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
Beta_elim_lyase
N36
Motif
Other DBs
NCBI-ProteinID:
BDU53151
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Position
complement(1405109..1407373)
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AA seq
754 aa
AA seq
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MKFRFPIVIIDEDFRSENTSGLGIRALADAIEGEGYEVMGATSYGDLSQFAQQQSRASAF
ILSIDDEEFTPGPDLDPAVLNLRNFIEEVRRKNADVPIYVYGETKTSRHLPNDILRELHG
FIHMFEDTPEFVARHIIREAKSYLESVQPPFFKALLDYAEDGSYSWHCPGHSGGVAFLKS
PVGQMYHQFYGENMLRADVCNAVEELGQLLDHNGAIGESERNAARIFNADHCFFVTNGTS
TSNKIVWHHTVAPDDVVVVDRNCHKSVLHAIIMTGAVPVFLKPTRNHYGIIGPIPQSEFE
PATIQAKIKANPLLKGVDAKKVKPRVLTLTQSTYDGVLYNTETIKTMLDGYVANLHFDEA
WLPHAAFNPFYGTYHAMGKKRERPMHSVVYATQSIHKLLAGISQASHVLVQDSQKTKLDR
HLFNEAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESIAEALDFRRAMRKVDDEY
GKDWWFKVWGPDELVEDGIGRAESWIIKGKGKSSKWHGFGNLADGFNMLDPIKATIVTPG
LDLNGKFDKTGIPASIVTKFLAEHGVIVEKTGLYSFFIMFTIGITKGRWNSLLTALQQFK
DDYDRNQPMWRILPEFCQKHRAYERMGLRDLCQHIHTLYAKYDIARLTTEMYLSDLTPAM
KPSDAYAQIAHRNTERVPVDDLLGRITTSLVTPYPPGIPLLIPGEVFNKKIVDYLKFARE
FNLQCPGFETDIHGLVEEVGEDGVKRYYADCVKA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttcgcttccccatcgtcatcattgacgaggattttcgttctgaaaatacgtca
ggtttgggcattcgtgcgctcgccgatgcgattgaaggcgagggctatgaagtcatgggc
gccacgagctatggcgacttgagccagttcgcgcaacagcagtcgcgtgccagtgcgttc
atcttgtcgattgacgatgaagagttcacgcccggccccgacctagaccccgctgtgttg
aacctgcgtaacttcatcgaagaagtgcgccgcaaaaacgccgatgtgccaatttatgtg
tacggcgaaaccaaaacgtctcgccacttgcccaacgacatcttgcgcgaattgcacggc
ttcatccacatgtttgaagacacgcccgagtttgtggcgcgtcacatcatccgtgaagcc
aagagctatttggagagcgtgcagcccccattcttcaaggccttgctcgattacgccgaa
gacggctcgtactcatggcattgccccggtcactcaggtggcgtggcgttcttgaagagc
cctgtgggccagatgtaccaccagttctacggcgaaaacatgttgcgtgctgacgtgtgt
aacgcggtggaagagttgggccagctgctggaccacaacggcgcgattggcgagagcgag
cgcaatgccgcccgcatcttcaatgcggaccattgcttcttcgtgaccaacggcaccagc
acctccaacaaaatcgtctggcaccacaccgtggccccagatgatgtggtggtggtggac
cgcaattgccacaagtcggtgttgcatgccatcatcatgaccggtgctgtgcctgtgttc
ttgaagcccacgcgcaaccactacggcatcatcggcccgattccgcaaagcgagtttgag
ccagcgacgatccaagccaagatcaaggctaacccgcttctcaagggtgtggatgccaag
aaggtcaagccccgtgtcttgacgctcacgcagtccacttatgacggcgtgttgtacaac
accgaaaccatcaaaaccatgctcgatggctatgtggccaacctgcactttgacgaggct
tggttgcctcatgccgcgttcaatccgttctacggcacctaccacgccatgggtaaaaag
cgcgagcgccccatgcattcggtggtgtacgccacgcagtcgattcacaagctgttggcc
ggtatcagccaagccagccacgtgttggtgcaagactcgcaaaaaaccaagttggaccgt
cacctgttcaacgaagcgtatttgatgcacaccagcaccagcccacagtacagcatcatt
gccagctgtgacgtggctgctgccatgatggagccacccggcggcaccgctttggtggaa
gaaagcattgccgaagctcttgatttccgtcgcgccatgcgaaaagtggatgacgagtac
ggcaaagactggtggttcaaggtttggggcccagacgaattggtggaggacggtattggc
cgtgccgagagctggatcatcaagggcaaaggcaagtcatccaaatggcatggctttggc
aacttggccgatggcttcaacatgttggaccccatcaaggccaccatcgtcacgcccggt
ttggacttgaacggcaagttcgacaagacaggtattccagccagcatcgtcacgaagttt
ttggctgagcacggcgtgatcgtggagaagacgggtctttacagcttcttcattatgttc
accatcggcatcaccaagggtcgttggaactcgttgttgaccgctttgcagcagttcaaa
gacgattacgaccgcaaccaacccatgtggcgcatcctgcccgagttctgtcaaaagcac
cgcgcttacgagcgtatgggcttgcgcgacctgtgccagcacatccacacgctttacgcc
aagtacgacatcgcacgtttgaccaccgagatgtacctgagcgacttgacgccggccatg
aagcccagcgatgcctatgcccaaatcgcccaccgcaacaccgagcgtgtgcctgtggac
gatttgttgggccgcatcaccaccagcttggtcacgccatacccacccggtattccgttg
ctcattcctggtgaagtgttcaacaagaaaatcgtggactacctcaagttcgctcgcgaa
ttcaacttgcaatgcccgggttttgaaaccgacatccacggcttggtggaagaggtgggc
gaagacggcgtgaaacgctattacgcagactgcgtcaaagcctaa
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