Limnohabitans sp. INBF002: LINBF2_14170
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Entry
LINBF2_14170 CDS
T09962
Name
(GenBank) murein transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
limi01011
]
LINBF2_14170
Enzymes [BR:
limi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LINBF2_14170
Peptidoglycan biosynthesis and degradation proteins [BR:
limi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LINBF2_14170
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GFIT
Motif
Pfam:
SLT
LysM
Motif
Other DBs
NCBI-ProteinID:
BDU53182
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Position
1436205..1437536
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AA seq
443 aa
AA seq
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MRFLLAVFSLSLALLTGCANLAEQGATSPGGLSPITKGNAKRDGVAQLNLPNDLWERIRK
NYQMPDLESDLVNDRTQWYANKPDYLQRMSERSSKYLFHIVEELEARKMPTELALLPFIE
SAFNPQAVSSARASGMWQFMPATGKSFDLKQNVFRDDRRDVQASTRAALDYLERLHKMFG
DWHLALAAYNWGEGNVGKAIARNKRAGLPTGYTDLNMPMETRMYVPKLQAMKNIVGNPPQ
YGVVLPSIPNHPYFQSVPLPRDMDVTVAAKLADISEQDFKALNPSAHRPVLLAAGSPNIL
LPWDNAEVFQRNYEASTLGRMATWTAWIAPSTMKVADAAKQVNMSEADFRAINNIPPRML
IKAGSALLVPRHANVLGDVTAQVADNGKLDLSPEAVAKRKAAAKGGKNAKGTKLASAKES
KGSGKKQVASKGDKKGDTKVAKK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgagatttttactcgctgtatttagccttagcctcgccctgctcacaggttgcgccaac
ttggccgagcaaggcgcgaccagccccggcggcttgagccccattaccaaaggcaatgcc
aaacgcgatggtgtggcgcaactgaacttgcccaacgacttgtgggagcgcatccgtaaa
aactaccaaatgcccgacctggaaagcgacctggtcaacgaccgcacccagtggtacgcc
aacaagcccgactacctgcaacgcatgagcgaacggtcaagcaaatacctgttccacatc
gttgaagaacttgaagcacgcaagatgcccaccgagttggccttgctgcctttcatcgag
agcgcgttcaacccacaagccgtgtctagcgcacgtgccagcggcatgtggcagttcatg
cccgccacgggcaaaagcttcgacctgaaacaaaacgtcttccgcgacgaccgccgcgat
gtgcaagcctccacccgcgcagcacttgactacctcgagcgcctgcacaaaatgtttggt
gactggcacttggccttggccgcctacaactggggcgaaggcaatgtgggcaaagccatt
gcgcgcaacaaacgcgcaggcttgcccacgggctacaccgacttgaacatgccaatggaa
acacgcatgtacgtgcccaagctacaggccatgaaaaacattgtgggcaacccgccccaa
tacggcgtggtgctgcccagcattcccaaccacccctacttccaaagcgtgcccctgcca
cgcgacatggacgtgacggtggcggccaagctggccgacatctcggaacaagacttcaaa
gccttgaacccttcggcacaccgccccgtgttgctggccgctggctcgcccaacatcttg
ctgccttgggacaacgccgaagtgttccagcgcaactacgaagcctccaccttgggtcgc
atggccacatggacagcctggattgcgccttccaccatgaaagtggccgatgcagccaaa
caggtgaacatgagcgaggcggactttcgcgccatcaacaacatcccgccacgcatgctc
atcaaagcgggctcagccctgctggtgccccgccatgccaacgtattgggtgatgtgacc
gcacaagtggctgacaacggcaaactcgatttatcccccgaagccgtggccaaacgcaaa
gccgcggccaaaggtggcaagaacgccaaaggcacaaagctggcgtctgccaaagaaagc
aaaggctcgggcaagaaacaagttgccagcaaaggcgataaaaaaggcgacaccaaggtc
gccaagaaataa
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