Limnohabitans sp. INBF002: LINBF2_14760
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Entry
LINBF2_14760 CDS
T09962
Name
(GenBank) hypothetical protein
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limi03016
]
LINBF2_14760
Enzymes [BR:
limi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
LINBF2_14760
Transfer RNA biogenesis [BR:
limi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LINBF2_14760
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
3HCDH_N
Pyr_redox_2
FAD_binding_2
FAD_binding_3
AlaDh_PNT_C
MurD-like_N
Pyr_redox
NAD_binding_7
UDPG_MGDP_dh_N
Thi4
Shikimate_DH
HI0933_like
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
BDU53241
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All DBs
Position
1505402..1507072
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AA seq
556 aa
AA seq
DB search
MTRRNAWHGCNSWCHTQASFDELAFLALWHDWAADAARPAHLHVVAHTTQPLKADALLTT
AAAHPELLSFAQQLADQCWGLLPGIHRLRFALNGDARRHTTATSQNSHSHARLSLTLCVG
QHEDWPEFADVLRAHPTGLCTPPVDAPALSERTVTIIGAGIAGAGTARALAERGWQVTVL
DAGDAPAAGASGLPVGVVAPHTSHDDSGVSRLSRAGLRLMEQTMRLLLTEGVDWGCTGVR
ERRLPGKTRRGGVPLSWLHEHTHTANDWTHKAPPPAPDDAYWHPHGAWLRPAQLVRALLN
HPNIRWQGHAKVDALKCITHEKHKASNAPTPQTTNPDHLANTSASKWQILQGGKVLAESS
RVVLAAGPGSAALIATATEDGCAPHINPLRGQVSWGLMADVPAGAYMPATPVNGNGSFVH
NITSPDGPAWYTGATYDRINGDARLLDADHAENLERLQALEPDTAAALAPLFATVGTDAP
RVHGWAGVRCGVHDRLPMTGRVPNTPEGVYMNAAMGSRGLTLGLLCGELLAAQWHGEPLP
IEARLAKFLDATRFKK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgtcgcaacgcatggcacggctgtaacagctggtgccacacccaagccagcttt
gacgagctggcttttcttgcgttatggcacgactgggccgccgatgcggcacgccccgcc
cacttgcatgtggtggcgcacaccacacagccgttaaaagcagatgcattgctaacaact
gccgctgcacacccagagcttctttcattcgcacaacaactggccgatcaatgctggggc
ttgctgcctggcatacatcgcttgcggtttgcgctgaatggcgatgcacgccgccacacg
actgcaacgtcacagaattcgcacagccatgcccgcctttcgctcacgctgtgcgtgggt
caacacgaagactggcccgagtttgccgacgtgctgcgcgcacatcccacgggcctgtgc
accccacctgtcgatgcccccgctttgagcgagcgcaccgtcaccatcatcggtgcaggc
attgcaggcgcaggcacggcacgcgcactggccgaacgcggctggcaagtgacggtgctg
gatgcaggggatgcgcctgctgcgggtgcatcgggcttgcccgtgggcgtggtcgcgcca
cacacctcgcacgacgacagtggtgtgtcacgtctctcgcgtgcgggcttgcgactcatg
gaacaaaccatgcgcttgttgctgaccgaaggtgtggattggggttgcaccggcgtgcgt
gaacgccgcctgcccggcaaaacccgacgcggtggtgtgcccctgagctggctccacgag
cacacccacaccgcgaacgactggacacacaaagcaccaccgcccgcccccgatgacgcg
tattggcacccacacggcgcgtggctcaggcctgcgcaattggtgcgtgcgttgctcaac
catcccaacatccgttggcaaggccacgcgaaagtggatgcactcaagtgcatcacacac
gagaagcacaaggcttccaacgcaccaacaccgcagacaacaaaccccgatcaccttgca
aacacaagcgcatcaaagtggcaaattctgcaaggcggcaaggtcttagccgaatcatca
cgcgtggtgctggctgcaggccctggctctgcagcactcatcgccaccgcaacagaagac
ggctgcgcgccgcacatcaacccgctacgcggacaagtgtcttggggcttgatggccgat
gtacctgcgggtgcgtacatgcccgccacaccggtgaacggcaatggcagctttgtgcac
aacatcacctcgcccgacggacccgcttggtacaccggcgccacgtatgaccgcatcaac
ggcgacgcccgtttactggatgccgaccatgctgagaacttagaacgcttgcaggcttta
gagccagacaccgctgcagcactggcccccttgtttgcgacggtaggcacagatgcccca
cgcgtacacggctgggctggtgtgcgctgcggcgtgcacgaccgcttgcccatgacggga
cgcgtgcccaacacacccgagggcgtgtacatgaatgccgccatgggctcgcgcggtttg
acactgggcttgttgtgcggtgaattgctggccgcacaatggcatggcgagcctttgccc
atcgaagcacgattggctaagtttttagatgccacgcggttcaaaaaatga
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