Limnohabitans sp. INBF002: LINBF2_15540
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Entry
LINBF2_15540 CDS
T09962
Symbol
gcdH
Name
(GenBank) glutaryl-CoA dehydrogenase
KO
K00252
glutaryl-CoA dehydrogenase [EC:
1.3.8.6
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00071
Fatty acid degradation
limi00310
Lysine degradation
limi00362
Benzoate degradation
limi00380
Tryptophan metabolism
limi01100
Metabolic pathways
limi01110
Biosynthesis of secondary metabolites
limi01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
LINBF2_15540 (gcdH)
09105 Amino acid metabolism
00310 Lysine degradation
LINBF2_15540 (gcdH)
00380 Tryptophan metabolism
LINBF2_15540 (gcdH)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LINBF2_15540 (gcdH)
Enzymes [BR:
limi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.6 glutaryl-CoA dehydrogenase (ETF)
LINBF2_15540 (gcdH)
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Motif
Pfam:
Acyl-CoA_dh_N
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Motif
Other DBs
NCBI-ProteinID:
BDU53319
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Position
complement(1585089..1586276)
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AA seq
395 aa
AA seq
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MSTSSTKFHWDDPFMLDLQLTDDERQVKEAAAAYCQERLAPRVLEAFRHEKTDASIFREM
GALGLLGPTIPETYGGAGMNYVCYGLVAREVERVDSGYRSMMSVQSSLVMVPINEFGSEA
QKQKYLPKLATGEWIGCFGLTEPNHGSDPGSMITRAKKVAGGYSLSGSKMWITNSPIADV
FVVWAKDDAGAIRGFILEKGWKGLTAPAVHGKVGLRASITGEIVMDEVFVPEENAFPDVR
GLKGPFTCLNSARYGIAWGALGAAEDCYHRARQYVLDRQQFGRPLAANQLVQKKLADMLT
EISLGLQSCLRLGRMKDEGIAAVEITSILKRNSCGKSLDIARVARDMMGGNGISDEFGVA
RHLVNLEVVNTYEGTHDVHALILGRAITGIAAFSN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcatcgaccaaattccactgggacgaccccttcatgctcgacctgcaattg
accgacgacgagcgtcaagtcaaagaggccgcagctgcttattgccaagaacgcttggcc
ccgcgcgtgttggaagccttccgtcacgaaaaaaccgatgcttctatctttcgcgaaatg
ggtgcgttgggcttgttgggccccaccattcctgaaacctatggcggcgcaggtatgaac
tatgtttgctacggtttggtcgcgcgcgaagttgagcgcgtggactctggctaccgctcc
atgatgagcgtgcaatcgtctttggtaatggtgcccatcaacgagtttggctctgaagcc
caaaaacaaaagtacttgcccaaactcgccaccggcgagtggattggttgctttggcttg
accgaacccaaccatggctctgaccccggcagcatgatcacgcgtgccaaaaaagtggcg
ggtggttactcgctgtctggctcaaaaatgtggatcaccaacagcccgattgcggatgtg
tttgtggtttgggccaaagacgatgcaggcgcgattcgcggcttcattttggaaaaaggc
tggaagggtttgaccgcccctgcggtacacggcaaggtgggcttgcgcgcgtcgatcacg
ggcgaaatcgtgatggacgaagtgtttgtgccagaagaaaacgcgttccctgatgtgcgc
ggcctcaaaggtccgttcacgtgtttgaacagtgcacgttacggcattgcttggggtgct
ttgggtgcggcagaagactgctaccaccgtgcacgccaatacgtgttggaccgtcaacag
tttggccgccccttggctgccaaccaattggtgcaaaagaagttggctgacatgctgacc
gaaatttctttgggtttgcagtcttgcctgcgcttgggtcgcatgaaagacgagggcatt
gccgcagtggaaattacctccatcctcaagcgcaacagctgtggcaagtcgctcgacatc
gcacgcgtggcgcgcgacatgatgggcggcaacggcatttctgacgagttcggtgtggct
cgccatttggtgaacctggaagtggtcaacacctacgaaggcacgcacgatgtgcacgct
ttgattttgggccgcgccatcactggcatcgccgccttcagtaactaa
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