Limnohabitans sp. INBF002: LINBF2_16740
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Entry
LINBF2_16740 CDS
T09962
Symbol
cysS
Name
(GenBank) cysteine--tRNA ligase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LINBF2_16740 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
limi01007
]
LINBF2_16740 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limi03016
]
LINBF2_16740 (cysS)
Enzymes [BR:
limi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
LINBF2_16740 (cysS)
Amino acid related enzymes [BR:
limi01007
]
Aminoacyl-tRNA synthetase
Class I (G)
LINBF2_16740 (cysS)
Transfer RNA biogenesis [BR:
limi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LINBF2_16740 (cysS)
Prokaryotic type
LINBF2_16740 (cysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
DALR_2
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1f
CysS_C
Motif
Other DBs
NCBI-ProteinID:
BDU53439
LinkDB
All DBs
Position
complement(1714437..1715810)
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AA seq
457 aa
AA seq
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MTLRIHNTLTRALENFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLKASGY
RVTYVRNITDIDDKIIKRSLENGETVRGLTDRMIDALHQDADALGIERPTHEPRAMDYVP
QMLAMIGILQDKGLAYQASNGDVNYAVRKFPGYGKLSGKSLDELQAGERVAVDDGKQDPL
DFVLWKSAKTSEPDEVKWASPFGAGRPGWHIECSAMSCEMLGQSFDIHGGGADLQFPHHE
NEIAQSEGANGQKMASVWMHNGFINVDNEKMSKSLGNFFTIRDVLKEFDAETVRFFVVRS
HYRSQLNYSDVHLNDARGALKRLYTALGTVTPDEVTIDWAEPHAARFKAAMDEDFGTPEA
VAVLFELASEVNRTQSAQTAGLLKALGGVLGLLQDDPKAFAQAGAGVDEEAIQAQIAARA
AAKAAKNFAEADRIRQALAADGIVLKDSPTGTTWERG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttcgcattcacaacacgctcacgcgtgcgctggagaacttttcgccgttagaa
cctggccatgtgcgcatgtacgtgtgcggcatgaccgtgtacgacctgtgccatttgggc
catgcccgttcgatggtggcgtttgatgtggtgcagcgctggctcaaggccagcggctac
cgcgtgacctatgtgcgcaacatcaccgacattgacgacaagatcatcaagcgttcgtta
gaaaacggcgaaaccgtgcgcggcctgaccgatcgcatgatcgacgccttgcaccaagac
gccgacgctttgggcatcgagcgccccacgcacgagccccgtgccatggactatgtgccg
caaatgctggccatgattggcatcttgcaagacaaaggcttggcctaccaagccagcaac
ggcgatgtgaactacgccgtgcgcaagtttcccggctatggcaagttgtccggcaagtcg
ctggacgagttgcaagcgggcgagcgcgtggcggtcgacgatggcaagcaagacccgctg
gactttgtgctgtggaaatcggcaaaaacaagcgagcccgacgaagtgaaatgggccagc
ccctttggcgcaggccgccccggctggcacatcgagtgctcggccatgagctgcgagatg
ttgggccaaagctttgacatccacggcggtggcgctgatttgcagttcccgcaccacgaa
aacgaaattgcccaaagcgaaggcgcgaacggccaaaagatggccagcgtgtggatgcac
aacggcttcatcaatgtggacaacgaaaaaatgtccaagagtttgggcaatttcttcacc
atccgtgatgtgctcaaagaatttgacgccgaaactgtgcgtttctttgtggtgcgcagc
cactaccgcagccagctcaattacagcgatgtgcatttgaacgacgcccgtggcgccttg
aagcgcctctacaccgcgttgggcacagtgacgcctgatgaagtgacgatcgattgggct
gagccccatgccgcacgcttcaaagccgccatggacgaagactttggcacccccgaagcc
gtcgccgtgttgtttgaactcgccagcgaagtcaaccgcacgcaatcggcgcagaccgct
ggtttgctcaaagccttgggcggcgtgttgggtttgttgcaagacgaccccaaagccttt
gcccaagccggtgcaggcgtggacgaagaagccattcaggcccaaatcgcggcccgcgct
gccgccaaggcggccaagaattttgccgaggcagaccgcattcgccaagccttagctgct
gatggcatcgtgcttaaagattcgcccacgggcacgacatgggagcgtggctaa
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