Limnohabitans sp. INBF002: LINBF2_17250
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Entry
LINBF2_17250 CDS
T09962
Symbol
garD
Name
(GenBank) galactarate dehydratase (L-threo-forming)
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00053
Ascorbate and aldarate metabolism
limi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
LINBF2_17250 (garD)
Enzymes [BR:
limi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
LINBF2_17250 (garD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF_GD_AH
Motif
Other DBs
NCBI-ProteinID:
BDU53490
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Position
complement(1761580..1763124)
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AA seq
514 aa
AA seq
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MTPLTIRMQPRDNVAIVANHGGLPAGTLLPDGLCLRDAVPQGHKVALVDIPANGAVLRYG
IAIGYALKDIPAGSWVHERLLQMPSARELDNLPIATVKPEPLPPLEGYTFEGYRNADGSV
GTRNILAITTTVQCVSGVVEFAVARIKAELLPKFPHVDDVVGLEHTYGCGVAIDADGAEI
PIRTLRNISLNPNFGGEVMVVSLGCEKLQPERLMPPGAIPINDQRGEALDVVCLQDDAHV
GFMSMIDDIMQTATRHLERLNLRRRETVPASELVVGVQCGGSDAFSGVTANPAVGYCTDL
LVRAGASVMFSEVTEVRDGIDQLTSRATTPEVAEAMIREMAWYDAYLARGRADRSANTTP
GNKKGGLSNIVEKAMGSIVKSGSAPISGVLSPGEKLKQKGLIYAATPASDFICGTLQLAA
GMNLHVFTTGRGTPYGLAEVPVIKVATRTDLARRWHDLMDVNAGTIADGTKTIEEVGTEL
FQLMLDVASGRKKTWAEHWKLHNALVLFNPAPVT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaccccactcaccatccgcatgcagcctcgagacaacgtggcgattgtggccaaccac
ggtggtttgcccgcaggcaccctgttgccagatggcttgtgcttgcgtgacgctgtgccc
caagggcacaaggtggcgttggtcgatattcctgcgaatggtgcggtgctgcgctatggc
attgcgattggctacgccttgaaagacattcctgcgggcagctgggtgcatgagcgtttg
ctgcaaatgccgtccgcccgcgagttggacaacttgcctatagccaccgtgaagcctgaa
cctttgccgccgctggagggctacaccttcgagggctaccgcaatgccgatggctctgtg
ggcacgcgcaatattctggccatcaccaccacggtgcaatgtgtgtcgggcgtggttgag
tttgccgtggcgcgcatcaaggctgagttgttgcccaagtttcctcatgtggatgacgtg
gtgggccttgagcacacctatggttgcggtgtggccattgatgccgatggtgcagagatt
cccattcgcaccctgcgcaacatcagcctcaaccccaactttggcggtgaggtgatggtg
gtcagtttgggctgcgaaaaattgcaacccgaacgcttgatgccacctggtgccatcccc
atcaacgaccaacgcggtgaagcgcttgatgtggtgtgtctgcaagacgatgcacatgtg
ggcttcatgtccatgattgacgacatcatgcaaaccgccacgcgccacctcgaacgcctg
aacttgcgccgccgcgaaaccgtgcctgccagcgagctggtggtgggtgtgcagtgcggt
ggcagcgacgcgttttcgggcgtgacggccaaccctgctgtgggctactgcaccgatttg
ttggtgcgcgctggcgcgagcgtgatgttctccgaggtgaccgaggtgcgcgatggcatt
gaccaactcacctcacgcgcgaccacgcccgaagtggccgaggccatgattcgtgaaatg
gcttggtacgacgcgtacctggcacgtggccgtgcagaccgcagtgccaacaccacgccg
ggcaacaaaaaaggtggcttgtccaacatcgtggaaaaagccatgggctcgatcgtcaag
tcgggctctgcgccgatttcgggcgtgttgtcgccgggtgaaaagctcaaacaaaaaggc
ctgatttacgccgccacaccagccagcgatttcatttgcggcacgctgcaattggccgca
ggcatgaacttgcatgtgttcaccacggggcgcggcacgccttatggtttggcggaagtg
ccggtcatcaaagtggccacacgcacagacctggcccgccgttggcatgacctgatggat
gtgaacgccggcaccattgccgatggcaccaagacgattgaagaggtgggcactgagctg
tttcagctcatgctcgatgtggccagtggccgcaaaaaaacctgggctgaacattggaag
ttgcacaacgccttggtgttgttcaaccccgcgcctgtgacctga
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