Limnohabitans sp. INBF002: LINBF2_17560
Help
Entry
LINBF2_17560 CDS
T09962
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
limi03009
]
LINBF2_17560
Ribosome biogenesis [BR:
limi03009
]
Prokaryotic type
ribosomal protein modification factors
LINBF2_17560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
BDU53521
LinkDB
All DBs
Position
1788453..1790648
Genome browser
AA seq
731 aa
AA seq
DB search
MEIKVNFLDKLRLEAKFDDFTVVADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCV
TRNIPTENIRLSQNNIVDPENRYQQIFKIQVELPPDIQEVDRRGILNSIERCTVKKVVQA
GPEFVIEEVENLDADAQSLLTLKHTSDTSTYIAGKDLPLEQTIANMSGLLADLGIKIEIA
SWRNIIPNVWSLHIRDAHSPMCFTNGKGSTKESALASALGEYIERLNNNHFYAGAFWGED
IANSEFVHYPNERWFKPNKKDALPKEILDTYCLNIYNPDGELRGSHLIDTNSGNTQRGIC
ALPYVRQSDGEVVYFPSNLIENLFVSNGMSAGNTLAEAQVQCLSEIFERAVKREILEGEI
CLPDVPQDVLAKYPSILAGIQGLEEQGFPVLVKDASLGGTYPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDLPPPTFESNAVTEPNNFVEHFIDSSGIVSWRF
FSAKADYEFVEWDFSGQGENSNAQEASTLFGILEDMGKETYTAVHDQLGAIACRILVPGY
SEVYPVEDLIWDNTNKALLFRADILNLHRLDDASLSSLLERLDNNELDDYSDIATLIGIE
FDENTEWGQLTVLELKLLIHLALKQFEEAQDLVGAFLQYNDNTVERKLFYQALNVVLEVL
LDPDLELKDYEVNFRRMFGNARIDAAIGSVDGTVRFFGLTPTSMKLEGLDRHHRLIHSYK
KLHQARANVAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaagcttcgcctggaagccaagttcgatgacttc
acagtggtcgccgaccagcccattcgctacaaaggcgatgggtcggcacctggccccttc
gattattttttggcctcatcggctttgtgtgcggcctattttgtgaagctgtattgcgtc
acgcgcaatatcccgaccgaaaacattcgtctctcgcaaaacaacatcgtcgacccagag
aaccgctaccagcagattttcaaaattcaagttgagctaccgccagacattcaagaggtg
gaccgccgcggtattttgaattcgatcgagcgctgcacggtcaaaaaagtagtgcaagca
gggcctgaatttgtcattgaagaagtcgagaacttggatgcagatgcacagtcgttgctg
acgctgaaacacacgtctgacaccagcacctacatcgcagggaaagacctgcctcttgag
caaaccatcgccaacatgtcaggcctcttggcagacttaggcatcaagattgaaattgcg
tcatggcgcaacatcattccaaatgtgtggtcactccatatccgtgatgcgcactcgccg
atgtgctttaccaacggcaagggctcaaccaaagaaagcgcattggcgtccgcactgggc
gaatacatcgagcggctcaacaacaaccatttctatgcgggtgccttttggggcgaggac
attgccaattcagaatttgtgcattacccgaatgagcgttggttcaagccaaacaagaag
gatgcgctgcccaaagaaattctggatacgtactgcctcaacatctacaaccccgatggc
gagctgcgtggctcgcacctgatcgacaccaactctggcaacacgcaacgcggcatctgc
gccctgccctacgtgcgtcagtcagatggcgaggtggtgtacttcccctccaacctgatc
gaaaacttgttcgtcagcaacggcatgagcgcgggcaacacgctggccgaagcgcaggtg
caatgcttgtccgaaattttcgaacgcgccgtgaagcgcgaaatcttggaaggtgaaatc
tgtttgcccgacgtgccgcaggacgtgttggccaagtaccccagtatcttggcgggcatc
caaggtttggaagaacaaggctttccggtgctggtgaaagacgcgtcattgggcggcacc
taccccgtgatgtgcgtcaccttgatgaacccacgcacaggcggtgtctttgcctcattc
ggtgcgcaccccagctttgaggtggcactggagcgcagcctcaccgaactgctgcaaggg
cgcagcttcgaaggtctgaacgatttgccaccgcccacatttgagagcaatgcggtcacc
gagcccaataactttgtggagcatttcatcgattccagcggcatcgtgtcatggcgcttc
ttcagtgccaaagcagattacgaatttgtggaatgggatttttctggccaaggtgagaat
tcaaatgcacaagaagcctcgaccctgtttggcattctcgaagacatgggcaaagagacc
tacaccgcggtccatgaccagctgggcgccatcgcctgcagaattttggtgccgggttat
tcagaggtttaccccgttgaagatttgatctgggacaacaccaacaaagccttgttgttc
cgcgctgatattttgaacttacaccgcttggacgatgccagcttgtcttccctgctggaa
cgcttggacaacaacgaactcgatgattactcagacatcgctaccttgatcggcattgaa
tttgatgaaaacacggaatggggccaactgaccgtgcttgaattgaagctcttgattcat
ctggctttgaagcaatttgaagaagcgcaagatcttgtgggcgccttcctgcaatacaac
gacaacacggtggaacgcaaattgttttaccaagccttgaacgtggtgctggaggtgttg
ctcgatccagacttagaactgaaagactatgaagtcaatttccgtcgcatgtttggcaac
gctcgaatagacgcggccattggctcagtggatggcacagtgcgattctttggcttgacg
cctaccagcatgaaactagaaggccttgatagacaccaccgcttgatccacagctacaag
aaattacatcaggcgcgcgccaatgtggcgaattaa
DBGET
integrated database retrieval system
