Limnohabitans sp. INBF002: LINBF2_17650
Help
Entry
LINBF2_17650 CDS
T09962
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LINBF2_17650 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
limi03011
]
LINBF2_17650 (rpsA)
Ribosome [BR:
limi03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LINBF2_17650 (rpsA)
Bacteria
LINBF2_17650 (rpsA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_PDCD11
GCS
SH3_9
Alpha-amylase_C_2
Nitrophorin
Motif
Other DBs
NCBI-ProteinID:
BDU53530
LinkDB
All DBs
Position
1801409..1803088
Genome browser
AA seq
559 aa
AA seq
DB search
MSESFAALFEESLKRSEMRTGEVITAEVVRIEHNHVVVNAGLKSEAYVPIEEFKNDKGEL
EVQAGDFVSVAIGSVENGYGDTILSRDTAKRLASWMSLEKALESGEFVTGTTSGKVKGGL
TVLVNGIRAFLPGSLIDTRPIKDLSPYENKTMEFKVIKLDRKRNNVVLSRRAVVEASMGE
ERAKLMETLKEGSIVNGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVRHPSEVVTAGQE
ITAKILKFDTEKNRVSLGLKQMGDDPWMGVNRRYPQSTRLFGKITNIADYGAFVELEPGI
EGLVHVSEMDWTNKNVAPSKIVSLGDEVEVMVLEIDEDKRRISLGMKQCKANPWQDFAQN
TKRGDRVKGPIKSITDFGVFVGLAAGIDGLVHLSDLSWNETGENAVREYKKGQEVEALVL
AVDVDRERISLGIKQLDSDPFTTFVSINDKGQTVTGKVKTVDAKGAEIDLGEDIVGYLRV
SEISRDRVEDASHVLKVGDEVTAVVVNVDRKTRNIQLSIKAKDAVDQQEAMASLSQQSKS
ENAGTTSLGALLRAKLDNN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcttttgccgccctatttgaagaatccctgaagcgctccgaaatgcgcaca
ggtgaagtgatcaccgctgaagtggttcgtatcgaacacaaccacgtcgtcgtgaacgct
ggcctcaagtccgaagcttatgtgccaatcgaagaattcaaaaacgacaagggcgagctc
gaagtccaagcgggtgacttcgtgtcagttgcgatcggtagcgttgaaaacggctacggc
gacaccattttgagccgcgacactgccaagcgtttggcatcgtggatgagcttggaaaaa
gctctggaatctggcgaatttgtcactggcacgaccagcggcaaagtcaagggtggcttg
accgtgttggtcaacggcatccgcgccttcttgcctggttcattgatcgacacacgtccg
atcaaagacttgtctccttacgagaacaagaccatggaattcaaggtcatcaagctcgac
cgcaagcgcaacaacgtcgtgttgtcacgccgcgctgtggtggaagcttcgatgggcgaa
gagcgcgccaagttgatggagactttgaaagaaggctctatcgtcaacggcgtggtcaag
aacatcaccgaatacggtgcattcgtggacttgggcggcatcgacggcctgttgcacatc
accgacatggcatggcgccgcgtccgtcacccatctgaggtggtcactgcgggtcaagaa
atcacggccaagatcctcaagttcgacaccgagaaaaaccgcgtgtctttgggcctcaag
caaatgggcgacgatccttggatgggcgtcaaccgccgctacccacaaagcactcgcttg
ttcggcaagatcaccaacatcgccgactacggtgcgtttgtggaactcgaacccggcatc
gaaggtttggtgcacgtgtctgaaatggactggaccaacaagaacgtcgctccttccaag
atcgtgtctttgggtgacgaagtcgaagtcatggtcctcgagatcgacgaagacaagcgc
cgcatcagcttgggcatgaagcaatgcaaagccaacccatggcaagatttcgctcaaaac
accaagcgcggcgaccgcgtgaagggcccgatcaagtcgatcaccgacttcggcgtgttc
gtgggcttggctgccggcatcgacggtttggtgcacttgtctgacttgtcttggaacgag
accggcgaaaacgccgtgcgcgaatacaagaagggtcaagaagttgaggctttggtcttg
gctgtggacgtggaccgcgagcgcatcagcttgggtatcaaacaactcgactcagaccca
ttcaccactttcgtgtcgatcaacgacaaaggccaaaccgttaccggcaaggtcaagact
gtggatgccaagggcgctgaaatcgacctcggcgaagacatcgtcggctacttgcgcgtc
agcgaaatttcacgcgaccgcgtggaagatgcgagccacgtgttgaaagtcggtgacgaa
gtgaccgctgtggtggtgaacgtggatcgcaagacccgcaacatccagttgtctatcaaa
gccaaagacgctgtggaccaacaagaagccatggcttccttgtcacaacagtcgaagagc
gaaaacgctggcaccaccagcctgggcgctttgttgcgcgctaagctcgacaacaactga
DBGET
integrated database retrieval system
