Limnohabitans sp. INBF002: LINBF2_17700
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Entry
LINBF2_17700 CDS
T09962
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00541
Biosynthesis of various nucleotide sugars
limi01100
Metabolic pathways
limi01250
Biosynthesis of nucleotide sugars
Module
limi_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LINBF2_17700 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
limi01005
]
LINBF2_17700 (hldD)
Enzymes [BR:
limi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LINBF2_17700 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
limi01005
]
Core region
LINBF2_17700 (hldD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
3Beta_HSD
GDP_Man_Dehyd
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_10
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
BDU53535
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Position
1805862..1806860
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AA seq
332 aa
AA seq
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MKIVVTGAAGFIGSNIIKGLNARGINNIIAVDDLTEGDKFRNIADLKIADYLDKDVFYEL
FAENAFGKVEAVFHEGACSDTMESDGKYMMDNNYTLSCGLFNACQQSGTRLLYASSAATY
GGSDTFVESPEYELPLNVYGYSKLLFDQRMRLECNNNFKKFKRQVVGFRYFNVYGPREQH
KGRMASVAFHQFNQFNAEGKVKLFGEYGGYAQGAQMRDFVFIDDVVAVNLWFLDNPDKSG
IFNLGSGRAQPFNDVALSVVNAMRAKKGEAALDLAGAAKAGLIEYVPFPDALRGKYQCYT
QADLTNLRASGCDHQFADVQSGVTQYMATLSK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtcgtcacaggcgccgctggttttatcggcagcaacatcatcaagggcctg
aacgcccgcggcatcaacaacatcattgcggtcgacgacctcactgaaggtgacaagttt
cgcaacatcgctgacttaaagattgccgactacctcgacaaagacgtgttctatgaactc
tttgcagaaaacgccttcggtaaagttgaagccgtgttccacgaaggcgcttgcagcgac
accatggagagtgacggcaagtacatgatggacaacaactacaccctgtcgtgtggtttg
ttcaacgcctgccaacaaagcggcacacgtttgctctacgcctcatccgctgccacctac
ggcggcagcgacacctttgtggagtcgcccgagtacgaactgccactcaatgtgtacggc
tactcgaagttgttgtttgaccaacgcatgcgcttggagtgcaacaacaacttcaagaag
ttcaagcgccaagtggtgggctttcgctacttcaatgtgtacggcccgcgcgagcaacac
aaaggccgcatggccagcgtggcgtttcaccagttcaaccaattcaatgctgaaggcaaa
gtgaagttgtttggcgaatacggcggctacgcccaaggtgcgcaaatgcgcgacttcgtg
ttcatcgacgacgtggtggccgtgaacctgtggttcttggacaacccagataaatctggc
atcttcaacctcggctctggccgcgcacagccgttcaacgatgtggccttgtcggtggtc
aacgcgatgcgcgccaaaaaaggggaagccgctcttgatttggcaggtgctgccaaagcg
ggcttgattgaatacgtgcccttccccgatgcgctgcgtggcaaataccagtgctacaca
caggcagacctgaccaacctgcgtgccagcggctgcgaccaccagtttgccgatgtgcaa
agcggtgtcacgcaatacatggcgacactgagcaagtaa
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