Limnohabitans sp. INBF002: LINBF2_17980
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Entry
LINBF2_17980 CDS
T09962
Name
(GenBank) ligand-gated channel
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limi02000
]
LINBF2_17980
Transporters [BR:
limi02000
]
Other transporters
Pores ion channels [TC:
1
]
LINBF2_17980
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Bac_chlorC
Motif
Other DBs
NCBI-ProteinID:
BDU53563
LinkDB
All DBs
Position
complement(1834644..1836749)
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AA seq
701 aa
AA seq
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MGRIEVTSGRDNDTQQRRESTASKIVIGREEIERQGDANLGEILKRMPGITLGGAPGRGG
GIRMRGLSQGYTQILLDGQRVPPGFSVESLTPEMIERIEIYRAPTAETGAQAIAGTINII
TREGRKGMPTELKVGSSFQGGYASPTASLVKYHDAEQWTANYTLSVNRYAAPDHSENELT
RDEIPVAGGNTTQHRYTNRSRISDSHYAREGLNATARLQLKGDPGETFTLMPFVALSQGS
TAGSIYANQTSTGYLPLTNGSTTASTGNDNHFAVARLNGQWRRKLSADSNMEWKFNVGGW
NSHNEFQQTSGNLLLLPSATENSHVQDRSANLSGKYTNVMGGGHQWVSGAEMESVRRTQE
VVGAYQTIPGSADYKASSMRYAMYSQDEWQLTPHWATHAGARYEGLTTQGNTATGDVTNH
NGVFTPLLHAMWRPAPDSRDQVRMSLTRSFKTPTMPSLLARRTYTRDDNSATNPDVSGNP
DLKPEIATGLDVAVERYLPQGGVLSASAFHRRVQNLIRNVTTYGPVPGVPGMSRWLSSPQ
NISEAITEGVELEAKFRMDQWVADAPHVDLRSNVSFYRSRVLSIDGPNNRLDQQPDMTAN
LGADYRLKAVPLTVGGNLNYNPGYTTRLSAEQLTTISQKRVMDVYGLWRVDGSTAWRLTL
SNLNPRNYNTGSVYSSAGVVENSSTQNRSWTNVQILLEKKL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcattgaagtcaccagtggccgtgacaacgacacgcaacagcgccgtgagtca
accgctagcaaaatcgtgattggtcgggaagaaatcgaacgtcaaggcgacgccaatctg
ggcgaaattttgaagcgcatgcctggcatcaccttggggggcgctcctggacggggcggc
ggcattcgcatgcgtggcttgagtcagggttacacacaaatcttgctcgatggccagcgt
gtgccgccaggtttctcggtggagtcactcacgccagagatgattgagcgcatcgaaatt
taccgcgcccccacggccgaaacaggtgcgcaagcgattgcaggcaccatcaacatcatc
acgcgtgaaggccgcaaaggcatgcccaccgagttgaaagtgggctcttcgtttcaaggc
ggttatgcatcgcccaccgcctcgttggtgaagtaccacgacgcggaacagtggacagca
aattacacactgtcggtcaatcgctatgcggcgccggaccacagtgaaaacgagttgacg
cgtgatgagattccagttgcgggtggcaatacaacgcagcatcgctatacgaaccgttca
cgtatcagcgacagccattacgcgcgtgaggggttgaatgccaccgcgcggttgcagctc
aaaggcgatccgggcgagacctttaccctgatgccatttgtcgcactgtcgcaaggcagc
acagctggcagcatttacgcgaaccaaacttcaacaggctacttgccgctaaccaacggc
agcaccacagcgagtacgggcaacgacaaccactttgctgttgcgcgtctcaatgggcaa
tggcgccgcaagctttcagcagatagcaatatggagtggaagttcaatgtgggcggatgg
aatagccacaacgaatttcaacaaacctctggcaaccttttgttattgccaagtgcgacc
gaaaattcgcatgtgcaagaccgatcggccaacttgagcggtaagtacacgaatgtgatg
ggcggtggccatcagtgggtgagtggtgcagagatggagtcggtgcgccgtacgcaggaa
gtagtgggagcctatcaaaccattccaggcagtgcagattacaaagctagctctatgcgt
tatgccatgtattcgcaagacgagtggcaactcacgccacattgggcgacgcatgcgggt
gcacgctacgaaggtttgaccacacagggcaacacagcaacaggtgatgtgaccaaccac
aacggtgtgttcacgcccttgcttcacgccatgtggcgccccgcccctgatagtcgtgat
caagtccgcatgagcctcacccgcagctttaaaacacccactatgccctctttgttggcg
cgtcggacctacacgcgcgatgacaacagcgccaccaaccctgacgtctcgggtaatccc
gatctcaagccagaaatcgccacaggtttggacgttgctgttgagcgctacttaccgcaa
ggtggggtgttgagtgcaagtgcatttcatcgccgtgtgcagaacttgattcgcaacgtc
accacgtatggccccgtgcccggtgtgccaggcatgtcgcgctggttgtccagcccacaa
aacatcagcgaagccatcaccgaaggcgtcgagttagaagccaagtttcgcatggaccaa
tgggtcgcagatgccccacatgtggacctgcgcagcaatgtgagtttttaccgttcacgt
gtactgagcattgatggccccaataaccggcttgaccagcaacccgacatgacggctaac
ctaggcgctgactaccgactcaaagccgtgccactgactgttggcggtaacctcaattac
aaccccggctacaccacgcgtttaagcgcggagcagttgacaacaatttcgcaaaagcgc
gtgatggatgtgtatggtttgtggcgtgtcgatggcagcacggcatggcgcttgaccttg
agcaacctcaatccacgcaactacaacacgggcagtgtgtacagcagtgctggcgttgtt
gaaaacagcagcacccaaaaccgcagctggaccaatgtgcaaattcttctcgagaaaaaa
ctatga
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