Limnohabitans sp. INBF002: LINBF2_18100
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Entry
LINBF2_18100 CDS
T09962
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00860
Porphyrin metabolism
limi01100
Metabolic pathways
limi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LINBF2_18100 (cobD)
Enzymes [BR:
limi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
LINBF2_18100 (cobD)
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Motif
Pfam:
CobD_Cbib
AmpE
V_ATPase_prox
DUF4170
Motif
Other DBs
NCBI-ProteinID:
BDU53575
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Position
complement(1845779..1846735)
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AA seq
318 aa
AA seq
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MSFLSLLLALLIEQARPLMPGNWVHRTVRAWVTWISQTLDAGHPRLAWTTWSLAVGLPAV
IATVVHWLLIALFGWPVAMIWSIAVLYATLGFRQFSHHFTDIRDALDVGDERLARELLAE
WQHVEVGSLPRSELLRHVIEHSVLSAHHHVFGVLSWFSVLAALGFGPAGAVVYRMSEMVS
RVWLASPKPSKGWVSDTLQAAARSAWRRVDWLPARLTAVAFAVVGNFEEAIDCWRNHAQR
FPDDNDGVVLAATAGALNVRLGGEALRADDSDETQDSESTPGRAPEMAHLPSVVGLVWRS
VVLWMVLLALLTLARLLG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgagttttctttccctgctccttgccctgttgattgaacaagcccgccctttgatgccc
ggtaattgggtgcatcgcaccgtgcgcgcgtgggtgacttggatcagccagacgctggat
gcgggacacccccgtttggcatggaccacgtggtccttggcggtcgggctgcctgctgtc
atcgccacggtggtgcattggctattgattgcgctgtttggttggcctgtggcgatgatc
tggagcattgcggtgctctatgccaccttgggctttcgccagttcagccaccacttcacg
gacatccgtgatgccttggatgtgggcgatgagcgtttggcgcgggaattgttggctgaa
tggcagcacgtcgaagtggggagcttgccccgcagcgaattgctgcgccatgtgattgaa
cactcggtgctctcggcgcatcaccatgtctttggcgtgttgagctggttctctgtgttg
gctgctttgggttttggccccgccggtgcggtggtttaccgcatgagcgagatggtgtca
cgtgtttggttggcatcgcctaagccgtccaaaggctgggtgagtgacaccttgcaagct
gccgcgcgcagtgcatggcgccgtgtggattggttgcctgcgcgcttgaccgcggtggca
tttgcggtggtcggtaactttgaagaagccatcgattgttggcgcaaccatgcccaacgt
ttcccggatgacaacgacggcgtggtgctggctgccaccgctggtgcgttgaatgtgcga
ttgggcggtgaagctttgcgtgcagacgacagcgacgagacccaagacagcgaaagcact
ccaggccgtgcgccagagatggcgcatctgcccagcgtggtgggcttggtttggcgcagc
gtggtgctgtggatggtgttgttggccttgctgaccttggcccgattgttgggttga
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