Limnohabitans sp. INBF002: LINBF2_18360
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Entry
LINBF2_18360 CDS
T09962
Symbol
acnB
Name
(GenBank) aconitate hydratase B
KO
K01682
aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00020
Citrate cycle (TCA cycle)
limi00630
Glyoxylate and dicarboxylate metabolism
limi00640
Propanoate metabolism
limi00720
Other carbon fixation pathways
limi01100
Metabolic pathways
limi01110
Biosynthesis of secondary metabolites
limi01120
Microbial metabolism in diverse environments
limi01200
Carbon metabolism
limi01210
2-Oxocarboxylic acid metabolism
limi01230
Biosynthesis of amino acids
Module
limi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
limi_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
limi_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LINBF2_18360 (acnB)
00630 Glyoxylate and dicarboxylate metabolism
LINBF2_18360 (acnB)
00640 Propanoate metabolism
LINBF2_18360 (acnB)
09102 Energy metabolism
00720 Other carbon fixation pathways
LINBF2_18360 (acnB)
Enzymes [BR:
limi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
LINBF2_18360 (acnB)
4.2.1.99 2-methylisocitrate dehydratase
LINBF2_18360 (acnB)
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Gene cluster
GFIT
Motif
Pfam:
Aconitase_2_N
Aconitase_B_N
Aconitase
Motif
Other DBs
NCBI-ProteinID:
BDU53601
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Position
complement(1867487..1870078)
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AA seq
863 aa
AA seq
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MLKAYREHVAERAALGIPPLPLDAKQTAELIELIKNPPAGEDAALMDLLTHRVPPGVDDA
AKVKASFLAAVAHGEVKVGLISKSKATELLGTMVGGYNVHPLIELLDDAEVAAVAGEALK
KTLLMFDFFNDVADKAKAGNAKAKEVMQSWAEGEWFTTRPEVEKKITVTVFKVPGETNTD
DLSPAPDAWSRPDIPLHYLAMLKNTREGAAFKPEEDGKRGPMQFIEDLKKKGHLVAYVGD
VVGTGSSRKSATNSVIWATGQDIPFVPNKRFGGVTLGGKIAPIFFNTQEDSGALPIEVDV
TKLEMGDVIDILPYDGKIVKNGATVTEFKLKSDVLFDEVRAGGRINLIIGRSLTAKAREF
LGLPASTLFRLPTAPIATKAGFTLAQKMVGRAVGLPEGQGVRPGTYCEPKMTTVGSQDTT
GPMTRDELKDLACLGFSADMVMQSFCHTAAYPKSVDVKTHRELPAFISNRGGVALRPGDG
VIHSWLNRLLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFGAATGVMPLDMPESILVRFK
GEMQPGVTLRDLVHAIPLYAIKKGLLTVAKAGKINEFSGRILEIEGLPNLKVEQAFELSD
ASAERSAAGCTIKLNKEPVQEYLKSNVVLMKNMIADGYADARTLARRIEKVEQWLAAPNL
LEADKDAEYAHVIDIDLADIKEPIVCCPNDPDDAKFLSEVSGTKIDEAFIGSCMTNIGHF
RAAAKLLGGQRDIPVKLWVAPPTKMDESELIKEGHYAAFGTAGARTEMPGCSLCMGNQAQ
VREGATVVSTSTRNFPNRLGKNTNVYLASAELAAITSKMGKFPTVAEYHEAMGVVNKDGE
AIYKYLNFNQIDEYVETAKGVTA
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaagcctaccgtgaacacgtagccgagcgcgcagcgctgggtatcccaccactg
cctttggatgccaagcaaacggctgaattgatcgagctgatcaagaacccacctgcaggc
gaagacgcagcgttgatggacttgttgacccaccgcgtgccacccggcgtggacgacgca
gccaaagtcaaagcctctttcttggccgctgtggcacacggtgaagtcaaggttggcttg
atctctaagtccaaagccactgagctgttgggcaccatggtgggtggctacaacgtgcac
cccctgatcgaattgctcgacgacgccgaagtggctgctgtggccggtgaagccttgaag
aaaactttgttgatgttcgacttcttcaacgacgtcgccgacaaagccaaggctggcaac
gccaaagccaaagaagtcatgcaaagctgggccgaaggcgagtggttcaccacacgtcct
gaagtcgaaaagaaaatcacagtcaccgtgttcaaggtgcctggcgaaaccaacaccgac
gacctgtcgccagcccctgacgcatggagccgtccagacattccattgcactacttggca
atgttgaaaaacacccgcgaaggcgcagcgttcaagcccgaagaagacggcaagcgcggc
cccatgcagttcatcgaagacctgaagaaaaaaggccatttggtggcctacgtgggcgac
gtggtgggtacaggctctagccgcaaatcagccaccaacagcgtgatctgggccacaggc
caagacatccccttcgtgccaaacaagcgcttcggtggcgtgactttgggcggcaagatt
gcccccatcttcttcaacacccaagaagactctggcgcattgccgatcgaagtggacgtg
accaagctcgaaatgggtgacgtcatcgacatcctgccctacgacggcaagattgtgaaa
aacggcgcgactgtgactgagttcaaactcaagagcgatgtgttgtttgacgaagtgcgc
gccggtggccgtatcaacttgatcattggtcgcagcttgaccgccaaggctcgtgagttc
ttgggtctgcctgcttctaccttgttccgtttgcccacagcgcctatcgccaccaaagct
ggtttcaccttggcgcaaaagatggtgggtcgtgcggttggtttgccagaaggccaaggc
gttcgccccggcacttactgcgaacccaagatgaccaccgtgggttcacaagacaccaca
ggcccgatgacccgcgacgagttgaaagacttggcttgcttgggcttctcggctgacatg
gtcatgcaatcgttctgccacacagcggcttaccccaagtcggtggacgtgaagacgcac
cgcgaattgccagcgttcatcagcaaccgtggcggcgtggctctgcgcccaggcgacggt
gtgattcactcttggttgaaccgtttgttgttgcctgacaccgtcggtacaggtggcgac
tcgcacacacgtttccccatcggtatcagcttcccagccggttctggcttggtggcgttc
ggtgctgccacaggcgtgatgcctttggacatgcccgagtccatcctggttcgcttcaaa
ggcgaaatgcaacccggcgtgaccttgcgcgacttggtgcacgcgattcctttgtacgcg
atcaagaaaggtttgttgaccgtggccaaggccggcaagatcaacgaattctctggccgc
attttggaaatcgaaggcttgccaaatctcaaggtcgaacaagcgtttgaattgtctgac
gcatctgccgagcgttcagctgcaggttgcacgatcaagctcaacaaagagcccgtgcag
gaatacctgaagtccaacgtggttctgatgaagaacatgatcgccgacggctacgccgac
gcacgcactttggctcgccgcattgagaaggttgaacagtggttggctgcgcctaacctg
ctcgaagccgacaaagatgccgagtacgcacacgtcatcgacatcgatttggccgacatc
aaagagcccatcgtgtgctgcccgaacgacccagatgatgcgaagttcttgtctgaagtg
tctggcaccaagatcgacgaagccttcatcggttcttgcatgaccaacatcggccacttc
cgtgctgctgccaagttgctcggcggtcaacgcgacatccccgtcaagttgtgggtcgca
cctccaacgaagatggacgagagcgagttgatcaaagaaggccactacgctgcgttcggc
actgctggtgcacgtaccgaaatgccaggctgctcgttgtgcatgggtaaccaagcacaa
gtgcgcgaaggcgcgaccgtggtgtctacctccacacgtaacttccccaaccgtttgggc
aagaacaccaacgtgtacttggcgtctgccgagttggccgccatcacctcgaagatgggc
aagttccccaccgtggccgaataccacgaagccatgggtgtggtgaataaagacggcgaa
gctatctacaagtacctgaacttcaaccaaatcgacgaatacgttgaaacggccaaaggc
gtgacagcgtaa
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