Limnohabitans sp. INBF002: LINBF2_18430
Help
Entry
LINBF2_18430 CDS
T09962
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00020
Citrate cycle (TCA cycle)
limi00190
Oxidative phosphorylation
limi00650
Butanoate metabolism
limi00720
Other carbon fixation pathways
limi01100
Metabolic pathways
limi01110
Biosynthesis of secondary metabolites
limi01120
Microbial metabolism in diverse environments
limi01200
Carbon metabolism
Module
limi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
limi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
limi_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LINBF2_18430 (sdhA)
00650 Butanoate metabolism
LINBF2_18430 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LINBF2_18430 (sdhA)
00720 Other carbon fixation pathways
LINBF2_18430 (sdhA)
Enzymes [BR:
limi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LINBF2_18430 (sdhA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
FAD_binding_3
GIDA
Pyr_redox_3
FAD_oxidored
NAD_binding_7
ThiF
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
BDU53608
LinkDB
All DBs
Position
1874535..1876331
Genome browser
AA seq
598 aa
AA seq
DB search
MTVKSSIPRRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGIGAS
LGNMNEDNWHYHFYDTVKGSDWLGDQDAIEYMCREAPKVVYDLEHMGMPFDRNPDGTIYQ
RPFGGHTANYGEKAVERACAAADRTGHAMLHTLYQQNVKAKTSFFVEWMALDLIRDDAGD
VVGVTALEMETGELYIMEAKTVMLATGGAGRIFAASTNAFINTGDGLGMAARAGIPLEDM
EFWQFHPTGVAGAGVLLTEGCRGEGAILRNCNGERFMERYAPAYKDLAPRDYVSRCMDQE
IKEGRGCGPNKDYINLDMTHLGADTIMKRLPSVFEIGHNFANVDITKEPIPVIPTIHYQM
GGIPTNINGQVVTQNANNESVVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGRAAGN
HIVEFNQKNKEHKPLPANAADVTLARLARLEANKTGEYAQDVANDIRNTMQSHASVFRTQ
ALMDEGVKQIATLRERVNNIGLKDNSKVFNTARIEALEVENLIEAAQATIVSAAARHESR
GAHTVNDYGDTPEHPNGRNDQDWHKHTLWHKEGNKLTYKPVQMKPLTVDSIPLQTRTF
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttaaaagctctatccctcgtcgcaagtttgacgtcgtcatcgtcggtgccggt
ggctctggcatgcgcgcttcgttgcaacttgcccgcgcaggtttgaacgtggctgttttg
tctaaagtgttccccacacgttcacacaccgtggcggcgcaaggcggcattggcgcctct
ttgggcaacatgaacgaagacaactggcactaccacttctatgacaccgtcaaaggttcc
gactggctcggcgaccaagacgcgattgaatacatgtgccgcgaagcgcccaaagtcgtg
tacgacttggagcacatgggcatgcctttcgaccgcaacccagacggcaccatttaccaa
cgccccttcggcggccacaccgccaactacggcgaaaaggccgtggagcgcgcgtgtgct
gccgctgaccgcaccggtcacgccatgttgcacacgctgtaccaacaaaacgtcaaagcc
aaaaccagcttcttcgtggagtggatggccctcgacctgattcgcgatgacgcgggtgat
gtggtgggcgtgactgccctcgaaatggaaacaggcgagctctacatcatggaagccaaa
acagtgatgttggccaccggtggtgcaggccgcatcttcgcagcttcgaccaacgcgttc
atcaacaccggcgacggtttgggcatggccgcacgcgctggcatcccactcgaagacatg
gagttctggcaattccaccccactggcgtggccggtgctggcgtgttgttgaccgaaggt
tgccgtggcgaaggcgctattttgcgtaactgcaatggcgagcgcttcatggagcgttat
gcccccgcctacaaagacttggccccacgcgactatgtgtcacgctgcatggaccaagag
atcaaagaaggtcgcggctgcggtcctaacaaggactacatcaacctcgacatgacccac
ttgggcgctgacaccatcatgaagcgtttgccttcggtgttcgaaattggccacaacttt
gccaacgtcgatatcaccaaagagcccatccccgtgatccccaccatccattaccaaatg
ggcggcatcccgaccaacatcaacggtcaagtggtcacgcaaaacgccaacaacgaaagc
gttgtggtgaatggtttgtacgctgtgggcgaatgctcttgcgtgtcggtgcacggcgct
aaccgcttgggcaccaactccttgctcgacttgttggtgttcggccgcgcagcgggcaac
cacattgttgagttcaaccaaaagaacaaagagcacaagcctctgccagccaacgcggct
gacgtgaccttggcgcgcttggcacgtttggaagccaacaaaactggtgaatacgcacaa
gacgtggccaacgacatccgcaacaccatgcaatcacacgccagcgtgttccgcacacag
gcgttgatggacgaaggcgtcaaacaaatcgctaccctgcgcgagcgcgtgaacaacatc
ggcttgaaagacaactccaaagtcttcaacaccgcacgcatcgaagccctggaagttgaa
aacttgatcgaagctgcacaagccaccatcgtgtccgccgctgcgcgtcacgaaagtcgt
ggcgctcacaccgtgaacgattacggcgacaccccagagcatccaaacggccgtaacgac
caagactggcacaagcacaccctgtggcacaaagaaggcaacaagctgacttacaagccc
gtgcaaatgaagccattgactgtcgacagcatcccgctgcagacccgtactttctga
DBGET
integrated database retrieval system
