Limnohabitans sp. INBF002: LINBF2_18820
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Entry
LINBF2_18820 CDS
T09962
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
limi03021
]
LINBF2_18820 (rpoH)
Transcription machinery [BR:
limi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LINBF2_18820 (rpoH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
DUF2390
Motif
Other DBs
NCBI-ProteinID:
BDU53647
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All DBs
Position
1908543..1909466
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AA seq
307 aa
AA seq
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MTAITHQPLAMTNPWGLVPSLGNLDAYITAANRLPMLTLEQEQEFARQLKDNNDIEAAGK
LVLSHLRLVVSVSRQYLGYGLPHADLIQEGNIGLMKAVKRFDPDQGVRLVSYAMHWIKAE
IHEYILKNWRMVKVATTKAQRKLFFNLRSMKQGFKADAADATHRNTLNPQEVNAVATKLN
VKPEEVLEMEMRMSGGDVLLDPTPNEDSDEAFGPIAYLTDTNHEPTAMMAAHQRDVLASD
GIAAALNVLDERSRRIVEERWLKVQDNGSGGMTLHDLAAEYGVSAERIRQIEVAAMKKMK
AALAEYA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaatcacccatcagccactcgctatgaccaacccttggggcttggttccgtcg
ctgggcaacttggatgcctacatcaccgctgccaaccgtttgcctatgctcacgctagag
caagagcaggagtttgcgcgtcaactcaaagacaacaacgacatcgaagccgctggaaag
ctggtgctctcgcacctgcgtttggtggtctcggtgtcgcgccaatacttgggctacggt
ctgccacacgccgacctgattcaagaaggcaacatcggcttgatgaaagccgtcaaacgc
tttgaccctgaccaaggcgtgcgtttggtgagctacgccatgcactggatcaaggccgag
attcacgaatacatcttgaaaaactggcgcatggtcaaagtggccaccaccaaagcccag
cgcaaactgtttttcaacctgcgctccatgaaacaaggcttcaaggctgacgcagccgat
gccacacaccgcaacaccctcaacccacaagaggtgaacgcggtcgcgaccaaactcaac
gtcaaacccgaagaagtgctggagatggaaatgcgcatgtccggcggcgacgtgctgctt
gaccccacacccaacgaagacagcgacgaagcctttggccccatcgcttatttgactgac
accaaccacgagcccaccgccatgatggccgcgcaccagcgcgatgtactggcgtctgac
ggcattgccgcagcactgaacgtgctcgacgagcgcagccgccgcatcgtggaagagcgc
tggctcaaagtgcaagacaacggctcgggcggcatgacgctgcacgacttggccgctgaa
tacggcgtgagcgctgagcgcatccgccaaatcgaagtcgctgccatgaagaaaatgaaa
gcggcgctggctgaatacgcgtaa
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