Limnohabitans sp. INBF002: LINBF2_18840
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Entry
LINBF2_18840 CDS
T09962
Symbol
ctaB
Name
(GenBank) protoheme IX farnesyltransferase
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00190
Oxidative phosphorylation
limi00860
Porphyrin metabolism
limi01100
Metabolic pathways
limi01110
Biosynthesis of secondary metabolites
limi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LINBF2_18840 (ctaB)
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LINBF2_18840 (ctaB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
limi01006
]
LINBF2_18840 (ctaB)
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
limi03029
]
LINBF2_18840 (ctaB)
Enzymes [BR:
limi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
LINBF2_18840 (ctaB)
Prenyltransferases [BR:
limi01006
]
Compound prenylation
Protoheme farnesyltransferase
LINBF2_18840 (ctaB)
Mitochondrial biogenesis [BR:
limi03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
LINBF2_18840 (ctaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-ProteinID:
BDU53649
LinkDB
All DBs
Position
complement(1910136..1911023)
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AA seq
295 aa
AA seq
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MSLASPFMSRLRQFNALTKPRVIQLIVFCALIGMVLAVPGVPSWPEVQLALLACLGIWFV
AGAAAAFNCLVEKGIDSRMKRTAWRPTAKGELSDRETLLFSTLMCAVGSFILYVWVNPLT
MWLTFATFVGYAVVYTVILKPLTPQNIVIGGASGAMPPVLGWAAMAGEVSPEALILFLII
FLWTPPHFWALALYRVEDYRKSGLPMLPVTHGNEFTRLQILLYTFVLFAACLMPFIYRMS
GWFYLVSAVILSLGFCGYGWALWRNYSDELARKTFRFSLIHLSLLFAALLIDHYL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgcttcccctttcatgtctcgcttgcgccagttcaatgcgctgaccaaaccg
cgcgtgattcaactcattgtgttttgtgccctgatcggcatggtcttggccgtgcccggt
gtgccgtcttggcctgaggtgcagttggcactgctggcgtgtttgggcatttggtttgtg
gccggcgccgccgccgcctttaattgcttggtggagaagggcattgattcacgcatgaag
cgcaccgcttggcggccgacggccaaaggtgagttaagcgaccgtgagaccttgctgttt
tccacgctcatgtgcgctgtgggttcgttcattttgtatgtgtgggtgaacccgctcacc
atgtggctgaccttcgccacctttgtgggctatgcggtggtttacaccgtcatcttgaag
ccactcaccccacaaaacattgtgattggtggtgcatcaggggccatgccaccggtgttg
ggctgggccgccatggcgggtgaggtgagccccgaggctttgattttgtttctcatcatt
ttcttgtggacgccgccgcatttttgggcgttggccttgtaccgcgtggaagactaccgc
aagtctggcttgcccatgctgcctgtgacacacggcaatgaattcacgcgtttgcaaatt
ctgctctacacctttgtgttgtttgcggcttgcttgatgcctttcatctatcgcatgagc
ggctggttctatttggtgagcgcagtgattttgagtctaggattttgcggctacggctgg
gccttgtggcgcaattactcggatgagctggcacgcaagacctttcgcttttctttgatt
cacctcagcctgttgtttgcagcgcttttgattgaccattacctctga
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