Limnohabitans sp. INBF002: LINBF2_20030
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Entry
LINBF2_20030 CDS
T09962
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LINBF2_20030 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
limi01007
]
LINBF2_20030 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
limi03016
]
LINBF2_20030 (lysS)
Enzymes [BR:
limi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LINBF2_20030 (lysS)
Amino acid related enzymes [BR:
limi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LINBF2_20030 (lysS)
Transfer RNA biogenesis [BR:
limi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LINBF2_20030 (lysS)
Prokaryotic type
Other AARSs
LINBF2_20030 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
PSD1
Motif
Other DBs
NCBI-ProteinID:
BDU53768
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All DBs
Position
2014129..2015670
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AA seq
513 aa
AA seq
DB search
MSNNNTPATPEAAPVDENQLMAERREKLKVMRERQAAGQGVAFPNDFKPAHHAATLHELH
GDKTAEVLTEEGQFAKVAGRMMLKRVMGKASFATLQDSTGRIQIYVTRDDVSEELYADFK
HWDLGDIVACEGKLFKTRTGELSIHATSIRMLTKSLRPMPDKFHGVADQEIKYRQRYVDL
MTDETARKRFMARSKAVSGIRDFMVQHNFLEVETPMLHPIPGGANAKPFTTHHNALDQEM
FLRIAPELYLKRLIVGGFERVFEINRNFRNEGISVRHNPEFTMMEFYAAYWNYQDLMHFT
EELVRDAAMKAAGTTLLTYGGKPVDLSQPFERLTIREAILKHTEAGDNVDNATWLINALQ
KLGFKEEKDKLSTRSLASLQVMYFEETVEEKLWQPTFICEHPVEISPLARASDNKPDVTE
RFELYITGREFGNGFSELNDAEDQAARFHAQVAAKDSGDDEAMFYDHDFVRALEYGMPPT
GGCGIGIDRLMMLLTDSPSIRDVILFPALRREA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacaacaacacccccgccacgcccgaagccgctcccgtcgacgaaaaccaactc
atggccgagcgccgcgagaagctcaaggtcatgcgcgagcgccaagccgcgggccaaggc
gttgccttccccaacgatttcaagcccgcgcaccacgctgccaccttgcacgagctgcat
ggcgacaaaaccgccgaggtgttgaccgaagaaggccagttcgccaaagtggcaggccgc
atgatgctcaagcgcgtgatgggcaaggccagctttgccacgctgcaagacagcacaggt
cgcatccagatttacgtcacacgcgatgacgtgagcgaagagctctacgccgatttcaaa
cactgggacttgggcgacatcgtggcctgcgaaggtaagttgttcaaaacccgcaccggc
gagttgtccatccacgccaccagcatccgcatgctcaccaagagcctgcgccccatgccc
gacaagttccacggcgtggctgaccaagagatcaaataccgccaacgctacgtcgatttg
atgaccgatgaaaccgctcgcaagcgcttcatggcgcgcagcaaagcggtcagcggcatt
cgcgacttcatggtgcaacacaacttcctcgaagtcgaaacgcccatgctgcaccccatc
cccggcggtgccaacgccaagccgttcaccacgcaccacaacgcgctggaccaagaaatg
ttcttgcgcatcgcgcctgagctgtacttgaagcgcttgatcgtgggcggttttgagcgc
gtgttcgaaatcaaccgcaacttccgcaacgaaggcatctcggtgcgccacaaccccgag
ttcaccatgatggagttctacgcggcgtattggaactaccaagacctgatgcacttcacc
gaagagctggtgcgcgatgccgccatgaaggccgctggcaccacgctgctcacctacggt
ggcaagccggtggacctgagccagccgtttgagcgcctcacgattcgtgaagccatcctc
aagcacaccgaagcgggcgacaacgtggacaacgccacatggttgatcaacgccttgcaa
aaactcggtttcaaagaagagaaagacaaactctccacccgcagcttggccagcttgcaa
gtgatgtactttgaagaaaccgtggaagaaaagctgtggcagcccaccttcatctgcgag
caccctgtggaaatttcacccttggcccgtgccagcgacaacaagcccgatgtgaccgag
cgttttgagctctacatcacaggccgcgagttcggcaacggcttcagcgagttgaacgac
gccgaagaccaagctgcacgcttccacgcccaagtggctgctaaagacagcggcgacgac
gaagccatgttctacgaccatgactttgtgcgcgccctcgaatacggcatgccacccacc
ggcggctgcggcattggcattgaccgtttgatgatgttgctgaccgacagccccagcatc
cgcgatgtcattttgttccctgctttgcgccgcgaagcttaa
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