Limnohabitans sp. INBF002: LINBF2_20760
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Entry
LINBF2_20760 CDS
T09962
Name
(GenBank) NOL1/NOP2/Sun family protein
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
limi03009
]
LINBF2_20760
Enzymes [BR:
limi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LINBF2_20760
Ribosome biogenesis [BR:
limi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LINBF2_20760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
MTS
Methyltransf_31
Ubie_methyltran
TRM5-TYW2_MTfase
GH3_N_vert
GCD14
Motif
Other DBs
NCBI-ProteinID:
BDU53841
LinkDB
All DBs
Position
complement(2085694..2087028)
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AA seq
444 aa
AA seq
DB search
MHPKALLEACTELVRLTLKFDHPADAVVSKFFRDYRKTYAFGPRERAALAETTYNVLRNK
LRFDHFAPSGSGPKERRLAILGFAQHLKDQAPANNAPKSAKHANNSPLDFLMSALNKQEA
AWLEACEAVSPADLMERHRHNMPEWLVEPLKAQVGEGFWPLVERLNGGAPLDLRVNTFTD
KRADVQHELKLAGIKAVDTPFSPWGLRIEGKPALSGLDAFSRGAIEVQDEGSQLLALLLD
AKRGEMVVDFCAGAGGKTLAIGASMRSTGRLYAFDTSGHRLESLKPRLARSKLSNVHPSA
IAHERDERVKRLSGKIDRVLVDAPCSGLGTLRRNPDLKWRQSPKAVQELTEKQTSILASA
ARLVKSGGRLVYATCSVLPEENEAIAQAFSAAHPNFVPLSAADTLTELKVANAASLCTTD
GLYLRLWPHLHATDGFFAAVWVAK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgcatccaaaagcccttcttgaagcttgtactgagcttgttcgcctcactttgaagttt
gaccaccctgccgacgcagtggtgtctaagtttttccgtgactaccgtaaaacctatgcc
ttcggcccgcgcgagcgtgctgccttggccgaaaccacttacaacgtgttgcgcaacaaa
ctgcgcttcgaccactttgcgccttcgggctccggccccaaagagcgccgcttggccatc
ctcggctttgcccagcatctgaaagaccaagcgcctgccaacaacgcccccaaaagcgcc
aagcacgccaacaacagcccgctcgactttttgatgagcgcgctcaacaaacaagaagct
gcctggctcgaagcctgcgaagccgtgagccccgctgacctgatggagcgccaccgccac
aacatgcccgagtggctggtggagccgctcaaagcccaagtgggcgagggcttttggcct
ttggtcgaacgcctgaacggcggcgcaccgctggacttgcgcgtgaacaccttcaccgac
aaacgcgccgatgtgcagcacgagttgaagctcgcgggcatcaaggccgtggacacaccg
ttttcgccttggggcttgcgcattgaaggtaagcccgccttgtcgggcctggacgcgttt
tcgcgtggcgcgattgaagtgcaagacgaaggctcgcagttgttggccctgttgctcgac
gccaagcgcggcgagatggtggtcgacttttgcgcgggcgcgggcggcaaaacgctggcc
attggcgcgtccatgcgcagcacaggccgtttgtatgcgtttgatacctcgggccatcgc
ttggagtcgctcaagccacgcttggcgcgcagcaagttgtccaacgtccacccatccgcc
attgcgcatgagcgcgacgagcgcgtcaagcgcctgagcggcaagattgaccgcgtgttg
gtggatgcgccttgttcgggcttaggcaccttgcgccgcaaccccgacctgaagtggcgt
caatcgcccaaggccgtgcaagagctcaccgaaaagcaaacctccatcttggccagcgcc
gcgcgcttggtgaagtcgggtggccgtttggtttatgccacgtgcagcgtgttgcctgaa
gagaacgaggcgattgcccaagccttcagtgcagcccatcccaactttgtgccgttgtca
gcagccgacaccttgactgagttgaaagtagccaatgccgcttcgctttgtacaaccgac
ggcttgtatttgcgcctttggccccatctacatgcgaccgacggcttcttcgccgcggtt
tgggtagccaaataa
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