Limnohabitans sp. INBF002: LINBF2_21130
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Entry
LINBF2_21130 CDS
T09962
Symbol
ccmF
Name
(GenBank) cytochrome c-type biogenesis protein CcmF
KO
K02198
cytochrome c-type biogenesis protein CcmF
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limi02000
]
LINBF2_21130 (ccmF)
Transporters [BR:
limi02000
]
Other transporters
Others
LINBF2_21130 (ccmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CcmF_C
Cytochrom_C_asm
DUF2651
Motif
Other DBs
NCBI-ProteinID:
BDU53878
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Position
complement(2124543..2126462)
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AA seq
639 aa
AA seq
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MIPELGNFALMLAAVVAVMQGVLPIAGTLVRNSQTQITLQSLARPTAALQFVLVAFAFGA
LAASFLNNDFSVLYVSQHSNSLLPKPYQFAAVWGGHEGSLLLWVLLLSLWTVAVAVFSRS
LPLDMVARVIGVLGLISVGFLLFILTTSNPFERLLPAAMDGKDLNPLLQDPGLVIHPPML
YMGYVGMAVAFAFAVSALMSGRLDAAWARWSRPWTVVAWTFLTFGIGLGSWWAYYELGWG
GWWFWDPVENASLMPWLVGTALIHSLMVTEKRGSFKAWTVLLAIAAFSLSLLGTFLVRSG
VLTSVHAFASDPKRGVFILVFLAVVVGASLTLFAWRAPRVALGGRMELVSRESFLLANSV
LLVVATAAVLLGTIYPLIIDALNMGKLSVGPPYFNAVFAPLLVPTVFLMVPGSVARWRDA
NVREIAHKLRWTFAGAVALAVLLPFVLGGWSIGAAFGLFLGCWVALGTAQQVIERVGKPG
RIGASFWGQHIAHLGMAVLVIGITGVKCYEVERDVRMQIGDVVTIAPYTFRLNSLDEVRG
PNYKAVRADVQVLRDDKVIEILQPEKRRYFSSAMAMTEAGIDSGFMRDLYVSLGEPLDDA
RTEWSMRVYYKPFVPWLWGGVLLMVLGGVLAALDRRYRK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgattccagaactcggtaatttcgcgctcatgctcgctgctgtggtggccgtgatgcaa
ggcgtgttgcccattgcaggcaccttggtgcggaactcgcaaacacaaatcacgttgcaa
tcgttggctcgccccacggctgctttgcaattcgtgttggtggcgtttgcgtttggtgca
ttggctgcttcgtttttgaacaacgatttttcggtgttgtatgtgtcgcagcattccaat
tccttgctacccaagccctaccaatttgcggcggtatggggtggccatgaaggttcgctc
ttgctgtgggtgttgttgttgtcgctgtggaccgtggctgtggcggtgttctcgcgcagc
ttgccactcgacatggtggcccgtgtgattggcgtgttgggtttgatttcggtgggcttc
ttgctgttcatcttgaccacctccaacccgtttgagcgtttgttgccagcggccatggat
ggcaaagatttgaatcccttgctgcaagacccaggcttggtcattcacccgcccatgctc
tacatgggctatgtgggcatggccgtggcatttgcgtttgcggtgtctgctttgatgagt
ggtcgcttagatgcggcgtgggcgcgttggtcgcgcccatggacggtggtggcttggacc
ttcctcacctttggcattggcctcggttcttggtgggcgtattacgaactcggctggggc
ggctggtggttttgggaccccgttgaaaacgcctcactcatgccttggttggttggcacg
gcactcattcactcgttgatggtgaccgagaaacgcggcagcttcaaagcatggacggtg
ttgctggccattgccgctttttcgctgtcgctgctagggacgttcttggttcgttcaggc
gtgctcacctcggtgcacgcgtttgcgtctgaccccaagcgcggtgtgtttattttggtg
ttcttggcggtggtggtgggcgcgtcgctcacgctgtttgcttggcgtgcgccacgcgtg
gccttgggtggccgcatggagttggtgtcgcgtgaatcgttcttgttggccaacagcgtg
ttgttggtggtggccactgcggcggtgttgctgggcacgatttacccgctcatcattgat
gcactcaatatgggtaagttgtcggtggggccgccttacttcaatgcggtgtttgcaccg
ttgctcgtgccgactgtgtttttgatggttccgggttcggtggcgcgttggcgtgatgcc
aatgtgcgtgagattgcccacaagttgcgttggacctttgctggcgcggttgcgctggcc
gtgctcttgccgtttgtgttgggtggttggtccatcggtgcggcgtttggtttgttcctc
ggttgctgggtggctttgggtacagcgcaacaagtgattgagcgtgtgggtaagccgggg
cgtattggcgcatctttctgggggcaacacatcgcgcacttgggcatggcggtgttggtg
attggcatcacgggtgtgaagtgttacgaggtcgagcgcgatgtgcgcatgcaaattggt
gacgtggtcaccatcgcgccttacaccttccgcttgaattcgctcgacgaagtgcgtggc
cccaactacaaggccgtgcgtgccgatgtgcaagtgctgcgcgacgacaaggtcattgaa
attttgcagcctgaaaagcgccgctatttctcatcggccatggcgatgaccgaagcgggc
attgactcgggcttcatgcgcgatttgtatgtgtcgttgggcgagccgctggatgacgca
cgcaccgagtggagcatgcgggtgtactacaaaccgtttgtgccgtggctgtggggcggt
gtgttgctgatggtgttgggtggcgtgttggctgcactggaccggagataccgcaaatga
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