Limnohabitans sp. INBF002: LINBF2_21930
Help
Entry
LINBF2_21930 CDS
T09962
Symbol
ispB
Name
(GenBank) octaprenyl diphosphate synthase
KO
K02523
octaprenyl-diphosphate synthase [EC:
2.5.1.90
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00900
Terpenoid backbone biosynthesis
limi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LINBF2_21930 (ispB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
limi01006
]
LINBF2_21930 (ispB)
Enzymes [BR:
limi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.90 all-trans-octaprenyl-diphosphate synthase
LINBF2_21930 (ispB)
Prenyltransferases [BR:
limi01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LINBF2_21930 (ispB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BDU53958
LinkDB
All DBs
Position
2201738..2202712
Genome browser
AA seq
324 aa
AA seq
DB search
MSTTPSNALALIAADMAEVDRVIAQRLDSGVPLVGTVSQYIISAGGKRIRPALLLLMAGA
LGYTDAQRHNLAAVVEFIHTATLLHDDVVDESTLRRGRPTANESFGNPASVLVGDFLYSR
AFQMMVDSGEMRVMEVLAEATNVIAEGEVLQLMNMHDASLDEAGYLRVIRSKTAKLFEAS
TRLAAILAKSSPDVEAACADYGQALGTAFQVIDDVLDYDGDAKELGKNLGDDLREGKNTL
PLIIAMQRGTPAQRQTIQSAIENGEMDALAEIVEIVRSTGALDATRAAASAEAERAIAAL
SILPTGPYREAMHALAAQLLDRRN
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
ttgtccaccacaccttccaacgccttagccctgatcgctgccgatatggcagaagttgac
cgcgtcattgcgcaacgcctggactcgggcgtgccgctggtgggcaccgtgtcgcagtac
atcatctccgcgggcggcaagcgaattcgcccagcgttattgctgctcatggccggcgct
ttgggatacaccgatgcgcagcgccacaacttggcagccgtggtggaattcatccacacg
gccaccttgctgcatgacgatgtggtggacgaatccaccctgcgccgtggccgccccacg
gccaacgaatcgtttggcaacccagccagcgtgctggtgggcgacttcttatattcccgc
gccttccaaatgatggtggattccggcgaaatgcgcgtcatggaagtgctggccgaagcc
accaacgtgattgctgaaggcgaagttcttcagttgatgaacatgcacgacgcctcgctg
gacgaagccggttatttgcgcgtgattcgctccaaaactgccaaactctttgaagccagc
acacgcttggccgccattttggccaaaagctcacctgacgttgaagcagcctgcgccgac
tacggccaagccttgggcacggccttccaagtgattgacgacgtgctcgactacgacggt
gatgccaaagaactgggcaaaaacttaggcgacgatttgcgcgaaggtaaaaacacctta
ccgctcatcattgccatgcagcgcggtacacctgcgcaacgccaaaccatccaaagcgcg
attgaaaatggcgaaatggatgccttggcagaaattgtcgagattgtgcgcagcaccggc
gcactagacgccacccgcgcggccgcgagcgctgaagctgaacgtgcgattgctgccttg
agtatcttgccaactggcccgtatcgcgaagccatgcatgccttggcggcgcaattgcta
gaccgccgcaactaa
DBGET
integrated database retrieval system