Limnohabitans sp. INBF002: LINBF2_21980
Help
Entry
LINBF2_21980 CDS
T09962
Name
(GenBank) hypothetical protein
KO
K02652
type IV pilus assembly protein PilB
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
limi02044
]
LINBF2_21980
02035 Bacterial motility proteins [BR:
limi02035
]
LINBF2_21980
Secretion system [BR:
limi02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
LINBF2_21980
Bacterial motility proteins [BR:
limi02035
]
Pilus system
Pilus assembly proteins
LINBF2_21980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
AAA_16
AAA_22
AAA_19
AAA_7
AAA_30
HerA_C
AAA
AAA_14
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BDU53963
LinkDB
All DBs
Position
2204682..2205671
Genome browser
AA seq
329 aa
AA seq
DB search
MDIAEKRVPQDGRIQYPYKDQTIDLRVSSLPTLHGEKIVVRILNFSRERPGLAALGYEPD
DRTKLLQALGRPHGLILMTGPTGSGKTLSLYSCLELLNRAEVNISTVEDPSEIHLPGANQ
VNINERAGLTFATTLRALLRQDPDVIMVGEIRDLETAEIAIQAAQTGHLVLSTLHTNDAP
STLARLRHMGIAAFNVAASVNLITAQRLIRRLCDKCKSPLDAEQTAFFFNTLTPQDSQAI
PADSRAHAALYKAVGCHACDKGYKGRIGIYQVMPVSDAMQTCIIRDNDTQTLAAQAALEG
VRTLRQAGWLKVLQGITTMDEVMALTNHG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggatattgcggagaagcgtgtaccgcaagatggccgaattcagtatccctacaaagac
caaaccattgatttacgggtcagctctttgcccacgttgcatggcgagaaaatcgtggtt
cgaattttgaatttctcccgtgaaaggccggggctggctgcgttggggtatgagccagat
gaccgcaccaaattacttcaagccctaggccgcccacatggcctgattttgatgacgggg
ccaacgggctctggcaaaaccttgtctctttacagctgccttgaattattaaaccgggca
gaagtcaatatctcaacggttgaggatccgtcagaaattcacctccctggcgcgaaccaa
gtcaatatcaatgagcgcgctggattgacttttgccaccacgcttcgggccttgctgcga
caagatcctgacgtgatcatggtgggtgaaattcgcgatttagaaactgccgaaattgcc
attcaagcggcacaaactggccatttagttctctcaacactgcataccaacgacgccccc
agcaccttagcgcggctgcgccacatgggcattgcggcattcaacgtggctgcgagcgtc
aacctcatcacagcacaacggctgatccgacgtttgtgtgacaaatgcaaaagcccttta
gatgcagaacaaaccgccttctttttcaacacattaacgccgcaagacagccaagccatt
ccagccgactcacgcgcacacgccgcactgtacaaagcggtcggctgccacgcctgcgac
aaaggctacaaaggacgcatcggcatttaccaagtcatgcctgtcagtgatgccatgcaa
acatgcatcatccgtgacaacgacacccaaaccttggctgcgcaagccgcactggagggc
gtgcgtaccttaaggcaagccggatggttgaaggtcttgcaaggcatcaccaccatggac
gaggtcatggccctcaccaaccatggctga
DBGET
integrated database retrieval system
