Limnohabitans sp. INBF002: LINBF2_22530
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Entry
LINBF2_22530 CDS
T09962
Name
(GenBank) penicillin-binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00550
Peptidoglycan biosynthesis
limi01100
Metabolic pathways
limi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LINBF2_22530
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LINBF2_22530
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
limi01003
]
LINBF2_22530
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
limi01011
]
LINBF2_22530
Enzymes [BR:
limi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LINBF2_22530
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LINBF2_22530
Glycosyltransferases [BR:
limi01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LINBF2_22530
Peptidoglycan biosynthesis and degradation proteins [BR:
limi01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LINBF2_22530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
BDU54018
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All DBs
Position
2256471..2258846
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AA seq
791 aa
AA seq
DB search
MAKNHTPEGSKEHAAASAAPRSLASQLLLWAFGIAAAIMLVVGLLVGVALAMAYPQLPDI
SDLADYRPKLSMRVYSVEGTQIGEFGEERRNLTPFKDIPKVMKDAVLAIEDARFYQHGGV
DYIGLMRASLANLGRAKSQGASTITMQVARNVYLSSEKTFTRKIYEILLTSKLEHMLSKD
QIFEIYLNQIYLGNRAYGFAAASEAYFGKPLKNISIAEAAMLAGLPKAPSAYNPIANPKR
ARARQLYIIERMEENGFITKEQAVAAKQEELKIRTAMSSLNTHADYVAEMARQLMFAQYG
PEIYTRGLNVYTTVRASDQQAAYFALRRGIMDFERRQHYRGPERFINLPEKAAELEDAID
DALIEQGDKGDLLAAVVLDATPKKVRVMRQNSEVLEITGDGLQPVQSGLSDKAAPNIKLR
PGALVRITKTAKGGWEITQLPEVEGGFVSIDPRDGAIHALVGGFDFNKNKFNHVTQAWRQ
PGSSFKPFIYSAALEKGFTPMTVVNDAPLFFDASVTGGQPWEPKNYDGTFEGPMTLRKGL
AKSKNMISIRVLQAVGAQNAQDWIAQFGFDAEKHPPYLTMALGAGSVTPMQMAAGYSVFA
NGGYRVNPYLITKVTDQMGKTLSEFTPTPLDESARAIDARNAFVMTSLLQEVTRSGTAAR
AQATLKRNDIYGKTGTTNDSMDAWFAGYHPTLTAVTWIGYDTPRKLGDRETGGGLSLPVW
ISYMQHALQNVPITEPTPPAGLSHESGDWAYAEFSKGGGVSSLGLDSRSGSSSEQLPAND
EKKKILDLFKN
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaaaccacacccctgaaggttcgaaagaacacgccgctgcgtcagcagcccct
cgctctttggcgagccaactcttgctgtgggccttcggcattgccgcagccatcatgctc
gtggtgggcttgttggtcggcgttgcgctggccatggcctatccacagctgcccgacatt
tccgacttggccgattaccggcctaagctctccatgcgggtgtactccgtcgaaggcaca
cagattggcgagtttggcgaagagcgccgcaacctcaccccattcaaagacatccccaag
gtgatgaaagacgcggtgctggccattgaagacgcgcgcttttaccaacacggtggcgtg
gactacatcggcctcatgcgcgccagcttggccaacttaggccgcgccaagagtcaaggc
gcgtccaccatcaccatgcaggtggcgcgtaacgtttacttgtcgtcagagaaaactttc
acgcgcaagatttatgaaatcttgctgaccagcaagctcgagcacatgctcagcaaagac
cagatttttgaaatctatctgaaccaaatttatttgggcaaccgtgcctacggttttgca
gctgcgtctgaggcctactttggcaagccgttgaaaaacatcagcattgccgaagcggcc
atgttggccggcctgcccaaagcaccatcggcttacaacccaattgccaaccccaagcgc
gcacgcgcacgccagctctacatcattgagcgcatggaagaaaacggcttcatcaccaaa
gagcaagccgtcgctgccaagcaagaagagttgaagattcgcaccgccatgagcagcctc
aacacacatgccgactacgtggctgaaatggcgcgccaactgatgtttgcgcaatacggc
cctgagatttacacacgcggcttgaatgtctacaccaccgttcgcgccagcgaccaacaa
gcggcctactttgcgctgcgccgcggcatcatggactttgaacgccgccaacactatcgc
ggccctgagcgcttcatcaacttgccagaaaaagcggcagagctggaagatgcaattgac
gacgccttgattgagcaaggcgacaaaggcgacttgctggccgccgtggtgctggacgcc
acgcctaaaaaagtccgcgtgatgcgccaaaacagcgaagtgctggaaatcacaggcgat
ggcctgcaacccgttcaatccggcctgtctgacaaagcagcccccaacatcaagctgcgc
ccaggcgcgctggtgcgcatcaccaagaccgccaaaggcggctgggaaatcacccaactg
cccgaagtcgaaggtgggtttgtgtccatcgacccacgcgacggcgcgattcacgcactg
gtgggcggctttgacttcaacaagaacaagttcaaccacgtgacccaagcttggcgccag
cccggctcaagcttcaagcccttcatttattcggcagccctagaaaaaggcttcacgccc
atgacggtggtgaacgatgcgccgctgttcttcgacgccagcgtcaccggcggccaaccg
tgggagcccaaaaactacgacggcacttttgaaggccccatgaccttgcgcaaaggtttg
gcgaaatcgaaaaacatgatttcgatccgtgtgctgcaagccgtgggcgcacaaaacgcg
caagactggattgcccaatttggctttgatgccgagaaacacccgccctacttgaccatg
gcgctgggcgctggctcggtcacgcccatgcaaatggcggcgggttattcggtgtttgcc
aacggcggctaccgcgtgaacccctacctcatcaccaaggtgacggaccaaatgggcaag
accttgtctgagttcacaccaacgcctttggatgaatcggcccgcgccattgatgcacgc
aacgcgtttgtgatgaccagcttgttgcaagaagtcacccgctcgggcacagcggcacgc
gcacaagccaccttgaagcgcaacgacatttacggcaaaaccggcaccaccaacgactcc
atggacgcttggtttgcgggttaccaccccacgctcacagccgtcacatggattggttac
gacaccccacgcaaattgggtgaccgcgaaaccggtggtggcttgagcttgcccgtgtgg
atcagctacatgcaacacgctttgcaaaacgtgccgattaccgaacccacgccgcctgca
ggcttgagccatgaaagcggcgattgggcctatgccgagttcagcaaaggcggcggcgtg
agcagcttggggctggacagccgttcgggcagcagcagcgaacaactgccggcgaacgac
gagaagaaaaagattctcgatttgttcaagaattaa
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