Limnohabitans sp. INBF002: LINBF2_22560
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Entry
LINBF2_22560 CDS
T09962
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00300
Lysine biosynthesis
limi00470
D-Amino acid metabolism
limi01100
Metabolic pathways
limi01110
Biosynthesis of secondary metabolites
limi01120
Microbial metabolism in diverse environments
limi01230
Biosynthesis of amino acids
Module
limi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LINBF2_22560 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LINBF2_22560 (lysA)
Enzymes [BR:
limi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LINBF2_22560 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NBD_C
Motif
Other DBs
NCBI-ProteinID:
BDU54021
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Position
2259500..2260777
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AA seq
425 aa
AA seq
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MTHTTLAGAPFVATQNNDLYLESVKLADLAHAHGTPLFVYSKAAMLSALAAYQRGFAGRN
ARICYAMKANSSLAVLQVFAQAGCGFDIVSGGELDRVIAAGGDVSKVIFSGVGKTRAEMR
KALEAGIACFNVESEAELEVLSDVAQSMGKRAPISIRVNPNVDAKTHPYISTGLKGNKFG
VAHERALATYQRAASLPGLQVTGIDCHIGSQITESTPYLDAMDRVLDLVQAIEAAGIAIH
HIDFGGGLGINYNGDTPPAADALWAQLLAKLDARGYGQRQLMIEPGRSLVGNAGVCLTEV
LYLKPGEQKNFCIVDAAMNDLPRPAMYEAFHQIVPVSARAGEAVTYDVVGPVCESGDWLG
RDRQLAVQSGDLLAVLSTGAYCMAMSSNYNTRGRAAEILVDGDKAHVIRRRETVADQMAC
ESLVR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaccacgcttgccggtgcgccttttgtggccacacagaacaacgatttgtat
ttggaaagcgtcaaactcgctgaccttgcgcacgctcacggcacgcccttgtttgtgtac
tccaaagccgccatgctcagcgccctcgcggcttaccaacgtggttttgcaggtcgcaac
gcgcgcatttgctacgccatgaaggccaattcgtctttggccgtgctgcaagtatttgca
caagcgggctgcggctttgacatcgtgtcaggcggcgagctggaccgcgtgatcgcggca
ggcggcgatgtctctaaagtcatcttttcgggcgtaggcaaaacacgtgccgaaatgcgt
aaagctttggaagcaggcattgcctgcttcaacgtcgaaagcgaagctgaactcgaagtg
ctcagcgacgtggcgcagagcatgggcaaacgcgcccccatcagcattcgcgtcaacccc
aacgtggatgccaaaacccacccctacatttcaacgggactcaaaggcaacaagtttggc
gtggcccacgaacgtgccttggccacttaccagcgcgcagccagcctgcccggcttgcaa
gtgacgggcattgattgccacatcggttcgcaaatcaccgagtccacgccttacctggat
gcgatggaccgtgtgctggacctcgtgcaagccattgaagccgcaggcattgccattcac
cacatcgactttggtggtggcctaggcatcaactacaacggtgacacgccacctgccgct
gatgcgctgtgggcgcagctgttggccaagctcgatgcacgcggttacggccagcgccag
ctgatgattgaacccggccgctcactcgtgggcaatgcgggtgtgtgtttgacagaggtg
ttgtatctgaagcccggcgagcaaaaaaacttttgcatcgttgacgccgcaatgaacgac
ctgccccgccctgccatgtacgaagccttccaccaaatcgtgccggtgtctgcacgtgca
ggtgaggccgtgacgtatgacgtggtgggccctgtgtgcgaaagcggcgattggttgggc
cgtgaccgtcaactggccgtgcagtcgggcgacttgctggcggtgttgtctacgggcgcg
tattgcatggcgatgtctagcaactacaacacgcgtggacgggcggctgagattttggtg
gacggtgacaaggcgcatgtcattcgtcgccgtgagactgtggctgatcagatggcttgc
gagtcgttggttcgttaa
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