Limnohabitans sp. INBF002: LINBF2_22640
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Entry
LINBF2_22640 CDS
T09962
Name
(GenBank) metal ABC transporter permease
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LINBF2_22640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
limi02000
]
LINBF2_22640
Transporters [BR:
limi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LINBF2_22640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA
AAA_25
AAA_29
AAA_22
DEAD
AAA_33
ABC_ATPase
RsgA_GTPase
AAA_21
AAA_5
APS_kinase
AAA_18
NACHT
nSTAND3
MMR_HSR1
DUF87
Cytidylate_kin
AAA_14
Zeta_toxin
AAA_28
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BDU54029
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Position
complement(2267688..2269496)
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AA seq
602 aa
AA seq
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MRHHAHSSAPAGQHVKQRPDSETLKRLFPYLWQYKWRVVAALTFMVGAKLANVSVPLLLK
ELIDAMSFKPNDPMAVIVVPVSLLVVYGVLRLSVSAFTELRELVFAKATQGAARQIALET
FQHLHALSLRFHLERQTGGMTRDIERGVRGIESLISYSLYSVVPTLIEVALVLSILAVKF
DVWFAGITLAALALYIVFTISVTEWRTQYRRQANEFDSAAHTKAVDSLLNYETVKYFNNE
AFEASRYDKSLEALRRARLKAQTSLSLLNTGQQLIIAVALVGMLWRATQGVVDGRMTLGD
LVMINAFMIQLYIPLNFLGVLYREIKQSLTDLDRMFTLLEKEREVADAPHASALELSGPP
TVKFESVVFAYEPTRPILHGISFEIPAGKTVAVVGPSGSGKSTLARLLFRFYDVGSGAIT
INGQDIRHVTQGSVRRAMGIVPQDTVLFNDTVRYNIAYGRTDATEAEVVQAARAAHIHDF
IAATPKGYDTMVGERGLKLSGGEKQRVAIARTLLKNPPIVIFDEATSALDSANERAIQAE
LQSAAQNKTTLVIAHRLSTVVDAHEILVLDAGRIMERGSHSELLALNGRYAQMWALQQSS
EV
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcatcacgcccattcttctgcccccgctgggcaacacgttaagcaacgccccgac
agcgaaaccctgaaacgcctcttcccgtatttgtggcaatacaaatggcgagtcgtcgcc
gcgttgaccttcatggtgggggctaagttggccaacgtgagcgtgcccttgcttctcaaa
gagttgattgacgccatgtcgttcaagcccaatgacccgatggcggtcatcgtggtgcct
gtgtctttgttggtggtgtacggcgtgctgcgtttgtcggtgtctgccttcaccgagctg
cgtgagttggtgtttgccaaagccacccaaggtgctgcgcggcaaattgcactggaaacg
tttcagcacttgcatgctttgagtttgcgttttcatttggagcgtcaaaccggtggcatg
acgcgcgacatcgagcgcggtgtgcgcggcattgaatcgctcatttcgtattcgctctac
agcgtggtgcccacgctgatcgaggtcgctttggtgctcagcatcttggccgtgaagttt
gatgtgtggtttgcgggcatcacgctggctgcgctggcgctgtacatcgtgttcaccatc
agtgtgaccgagtggcgcacccagtaccgccgtcaagccaacgagtttgattctgccgcc
cacaccaaggccgtggactcgctgctcaattacgaaaccgtcaaatacttcaacaacgaa
gccttcgaggcttcgcgctatgacaagagcttggaggccttgcgccgtgcgcgtctgaaa
gcacaaacgtcgttgtcgttgctcaacacggggcagcaactcatcatcgccgtggccttg
gtgggtatgttgtggcgcgccacgcaaggcgtggtggacggtcgcatgaccttgggtgat
ttggtgatgatcaacgccttcatgattcagctctacattccgctcaactttttgggcgtg
ctgtaccgtgaaatcaaacaaagtttgacggacttggatcgcatgttcacgctgctcgaa
aaagagcgcgaagtggcggatgcgccccatgcttcggcgcttgaattgagtggcccgccg
acagtgaagtttgaatccgtggtgtttgcgtatgaacccacgcggcccatcttgcatggc
atcagcttcgagattcctgcgggcaaaacggtggcagtggtgggcccttcgggctcgggc
aagtccaccttggcgcgcttgctgtttcgtttttacgacgtgggctcgggcgcgatcacc
atcaacggccaagacattcgccacgtcacgcaaggcagcgtgcgccgagccatgggcatc
gtgccgcaagacaccgtgttgttcaacgacaccgtgcgctacaacatcgcttacggccgc
accgacgcgaccgaagctgaggtggtgcaggccgcacgcgccgcacacattcacgacttc
atcgcggccacacccaaaggctacgacacgatggtgggggagcgcggcctgaagttgtcg
gggggtgaaaagcaacgtgtggcgattgcccgtaccctgttgaagaacccgccgattgtg
atttttgacgaagccacttcggcgttggacagtgccaatgagcgtgccattcaggctgag
ttgcaaagtgccgcgcagaacaaaaccaccttggtgattgcgcaccgtttgtcgaccgtt
gtcgatgcgcatgagattttggtgttggacgcggggcgcattatggagcggggttcgcac
tcggagttgttggcgctgaatgggcggtatgcgcagatgtgggcgttacagcagtcttcg
gaagtttga
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