Limnohabitans sp. INBF002: LINBF2_23000
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Entry
LINBF2_23000 CDS
T09962
Symbol
hmgcL
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00280
Valine, leucine and isoleucine degradation
limi00650
Butanoate metabolism
limi00907
Pinene, camphor and geraniol degradation
limi01100
Metabolic pathways
limi01120
Microbial metabolism in diverse environments
limi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LINBF2_23000 (hmgcL)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LINBF2_23000 (hmgcL)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LINBF2_23000 (hmgcL)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LINBF2_23000 (hmgcL)
Enzymes [BR:
limi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
LINBF2_23000 (hmgcL)
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Motif
Pfam:
HMGL-like
COX7B
Motif
Other DBs
NCBI-ProteinID:
BDU54065
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Position
complement(2308578..2309492)
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AA seq
304 aa
AA seq
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MLTSLPHRVRLIDVGPRDGLQNEKQPVPAAVKVELVHRLQDAGLNEIEVTSFVSPKWVPQ
MADNAEVMAGIHRQPDVRYSVLTPNLQGFEAALKTKPDEIVVFGAASEAFSQKNINCSIA
ESIERFAPVVKAARDAGIAVRGAMSCTVGCPYEGEIAPERVGYLAGLMKSIGIQRVDVAD
TIGVGTPRKVQAAMEATLRHYALNDVSGHFHDTYGQALVNTLAALQMGVWNFQSSVAGLG
GCPYAKGATGNVATEDVVYMMQGMGIETGIHLDKLIDAGVFISNALGRQPNSLVSRAVLN
KRAV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgttgacctctttgccgcatcgtgtgcgtttgattgatgtggggccgcgtgatggcctg
caaaacgaaaagcagcccgtgcctgccgccgtcaaggtggagctggtgcatcgcctgcaa
gacgccggtttgaacgaaattgaagtcaccagttttgtgtcacccaaatgggtgccgcaa
atggccgacaacgccgaggtgatggcgggcattcaccgccagcccgatgtgcgctactcg
gtgctcacccccaatttgcaaggctttgaagctgcgttgaaaaccaagcccgatgaaatc
gtggtgtttggcgcggccagcgaagccttcagccaaaagaacatcaactgctcgattgca
gaaagcattgagcgctttgctcccgtggtgaaggccgcgcgcgatgccggcattgccgtg
cgcggcgccatgagctgcaccgtgggctgcccttacgagggtgagattgcgccagagcgt
gtggggtacttggcgggcttgatgaagagcattggcattcagcgcgtggacgtggccgac
accattggtgtgggcaccccgcgcaaagtgcaagcggccatggaggccacgctcagacac
tatgcgctcaatgatgtgtcgggccactttcacgacacctatggccaagccttggtcaac
accttggccgctttgcaaatgggcgtgtggaatttccaatcttcagtggccggcttgggc
ggttgtccgtatgccaaaggtgccactggcaacgtggccaccgaagacgtggtctacatg
atgcaaggcatgggcattgagaccggcattcatctcgacaagctcattgatgcaggtgtg
ttcatcagcaacgccttggggcgccaacccaattccctggtgtcccgcgcggttttgaac
aaacgcgccgtttga
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