Limnohabitans sp. INBF002: LINBF2_23030
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Entry
LINBF2_23030 CDS
T09962
Name
(GenBank) biotin-dependent carboxyl transferase
KO
K01969
3-methylcrotonyl-CoA carboxylase beta subunit [EC:
6.4.1.4
]
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi00280
Valine, leucine and isoleucine degradation
limi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LINBF2_23030
Enzymes [BR:
limi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
LINBF2_23030
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Gene cluster
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Motif
Pfam:
Carboxyl_trans
ACCA
MdcE
Motif
Other DBs
NCBI-ProteinID:
BDU54068
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Position
complement(2312372..2313979)
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AA seq
535 aa
AA seq
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MTVLHSQLNPRSADFTANVAAMRTVVDDLKAHLEKIAVGGGEAARAKHTARGKLLPRDRV
QMLLDPGTPFLEVAPLAALNMYNNDAPCAGLIAGIGRVSGVDCMIVCNDATVKGGTYYPL
TVKKHLRAQEIAQQNNLPCIYLVDSGGANLPNQDEVFPDRDHFGRIFFNQANMSAQGIAQ
IAVVMGSCTAGGAYVPAMSDETIIVKNQGTIFLGGPPLVKAATGEVVTAEDLGGGDVHTR
LSGVADHLAQNDVHALALARQTVKNLNAQKQPNIATHAPVQPKYDAQELYGVIPTDTRKP
FDVREIIARIVDGSEFDEFKARFGTTLVCGFARIEGMPVGIIANNGILFSESALKGAHFI
ELCCQRKIPLVFLQNITGFMVGRKYENEGIARNGAKMVTAVATAAVPKFTIIIGGSFGAG
NYGMCGRAYSPRFLWMWPNARISVMGGEQAASVLATVKRDGIEGKGGQWSAEEEQAFKDP
IRQQYEEQGHPYFATARLWDDGVIDPADTRRVLALGLSASLNAPIPETKFGLFRM
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgactgttttgcattcccaactcaacccacgctctgccgatttcacggccaacgtcgct
gccatgcgcaccgtggtggatgacctcaaggcccatctcgaaaaaatcgccgtcggcggt
ggcgaggccgcacgcgccaaacacaccgcacgcggcaagctgctgccccgcgaccgcgtg
caaatgttgctcgatccaggcacgccattccttgaggtggccccactcgccgcgctcaac
atgtacaacaacgacgcgccgtgcgcaggcttgatcgcgggcattggccgcgtcagcggt
gtggactgcatgatcgtctgcaatgacgccacggtgaagggtggcacctactacccgctc
acagtgaagaagcatttgcgtgcgcaagaaattgcgcagcaaaacaacttgccttgcatt
tacttggtcgactcgggcggtgccaacttgcccaaccaagacgaggtgttcccagaccgt
gaccactttggccgcatctttttcaaccaagccaacatgagcgcgcaaggcattgcgcaa
attgcggtggtcatgggcagctgtaccgcaggcggcgcgtatgtgccggccatgagcgac
gaaaccatcatcgtgaaaaaccaaggcaccatcttcttgggcggccctcctttggtgaag
gccgccaccggtgaagtggtgacagccgaagacctgggcggtggtgatgtgcacacgcgc
ctctccggcgtggccgaccacctcgcgcaaaacgatgtgcatgcattggcgctggcgcgt
cagacagtgaaaaacctcaacgctcaaaagcagcccaacattgccacgcacgcgcctgtg
cagccgaagtacgacgcgcaagagttgtatggcgtcattcccaccgacacacgcaagccg
tttgatgtgcgcgaaatcattgcgcgcatcgtcgatggcagcgagttcgatgaattcaaa
gcccgctttggcaccacgctggtgtgcggctttgcgcgcatcgaaggcatgcctgtgggc
atcattgccaacaacggcatcttgttcagcgagtctgccttgaagggcgcgcacttcatt
gagctgtgttgccaacgcaaaatcccgctggtgtttttgcaaaacatcaccggcttcatg
gtgggccgcaaatacgaaaacgaaggcattgcccgcaacggcgccaagatggtcacggca
gtggccaccgccgctgtgcccaaattcaccatcatcattggtggcagttttggtgcgggc
aactacggcatgtgtggccgcgcgtacagcccccgctttttgtggatgtggccgaatgcg
cgcatctccgtcatgggcggcgagcaagccgccagcgtgttggccaccgtcaagcgcgat
ggcattgagggcaaaggcggtcagtggagcgccgaagaagagcaagccttcaaagacccg
attcgccaacagtacgaagagcaaggccatccttatttcgccaccgcgcgtttgtgggac
gacggtgtgattgaccccgctgacacacgccgtgtcttggctttgggattgagcgcttcg
ttgaacgcgcccattcctgaaaccaagtttggtttgttccgcatgtga
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