Limnohabitans sp. INBF002: LINBF2_23480
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Entry
LINBF2_23480 CDS
T09962
Name
(GenBank) ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
limi03009
]
LINBF2_23480
Enzymes [BR:
limi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LINBF2_23480
Ribosome biogenesis [BR:
limi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LINBF2_23480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_25
Methyltransf_31
NusB
Methyltr_RsmF_N
FtsJ
Methyltransf_12
Methyltransf_15
Cons_hypoth95
Methyltransf_37
TRM
NPLP1_N
Motif
Other DBs
NCBI-ProteinID:
BDU54113
LinkDB
All DBs
Position
complement(2377441..2378781)
Genome browser
AA seq
446 aa
AA seq
DB search
MSEHTSTSIPLWQQLQAVAQALAQVRRGVSGTAALDAVPSALRPGVQALLFQALRQLGRA
QALRAQLASRAPAPLPDALLCTALALAWDPENAPYEPHTLVNQAVEAAKQTRSLQMQANF
LNACLRRFLRERDALVRATDNDVHAQWNHPEWWVKRLQKDHPDHWQDILRANNQAAPMTW
RVNTARTSREALQTDWANHGLPSHPVGEQGLVLEQAHNVRDIPGFAEGLCSVQDAAAQCA
AQILLNGLAPAHQPLRILDACAAPGGKTAHLLEMLNDQSEVIALDIDPQRCERIAQNMQR
IGRSAKVIAADAALTKTWWDGQLFDAILLDAPCTASGIVRRHPDVRWLRREADIDKLAAI
QKNLLKQLWPLVKPGGRLLYCTCSVFRAEGENQAKTFVEHNTNARLLPSLGHLRPQTHAT
TALLTDNLPGDHDGFYYALLEKLPTP
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacacacgtctacctccatccccttgtggcaacagctgcaagctgttgcgcaa
gccttggcgcaagtgcgtcgtggtgtctctggcacggctgcgctagacgcggtgccatcg
gcgctgcgtcccggtgtgcaagccttgctgtttcaagcgctgcgacaactcggccgtgcg
caagccctgcgtgcgcagttggcctcgcgtgcgcccgccccgctgcccgatgcgctgttg
tgcacggcactggccttggcgtgggacccagagaacgcgccctatgagccgcacaccttg
gtgaaccaagctgttgaggctgccaagcaaacccgcagcttgcaaatgcaggctaacttt
ttgaatgcgtgtttgcgccgttttttgcgtgagcgcgatgcgcttgtgcgtgccacagac
aacgatgtgcatgcgcaatggaaccaccccgagtggtgggtcaagcgtctgcaaaaagac
caccctgaccattggcaagacatcttgcgcgccaacaaccaagcggcacccatgacatgg
cgtgtcaacaccgcgcgcaccagtcgcgaagctttgcaaacggactgggccaaccatggt
ttgccgtcgcatcctgtgggcgaacaaggcttggtgcttgagcaagcgcacaacgtgcgt
gacattcctggttttgccgaaggcttgtgttcggtgcaagatgcagcggcccaatgtgcc
gcgcaaattttgttgaatggtttggctcctgcgcatcaaccgctgcgcatcttggatgcg
tgtgcggcacctggcggcaaaacagcacatttgctggaaatgttgaacgaccagtccgag
gtcatcgctttggacattgacccacagcgttgtgagcgcatcgcgcaaaacatgcaacgc
attgggcgtagcgccaaagtcattgcggcagatgccgcgttgaccaaaacttggtgggat
ggtcagctgtttgatgcgattcttttggatgcaccctgtacagcctctggcattgtgcgg
cgtcaccccgatgtgcgttggttgcgtcgagaggcggacatcgacaaactcgcggcgatt
cagaaaaacttactcaagcagctttggcccttggtcaagcccggcggtcgtttgctgtat
tgcacatgctcggttttcagagccgagggcgagaaccaggccaaaacgtttgttgaacac
aacaccaatgcccgtttactgccgtctctgggccatttaaggcctcaaacccatgcaacg
acggccttgctcaccgacaatctaccaggtgaccatgacggcttttattacgcactgctg
gaaaaacttcctacgccttga
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