Limnohabitans sp. INBF002: LINBF2_23910
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Entry
LINBF2_23910 CDS
T09962
Name
(GenBank) hypothetical protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limi03400
]
LINBF2_23910
Enzymes [BR:
limi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LINBF2_23910
DNA repair and recombination proteins [BR:
limi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LINBF2_23910
Prokaryotic type
LINBF2_23910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
BDU54156
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All DBs
Position
complement(2424359..2425561)
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AA seq
400 aa
AA seq
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MYEFPPTPEAAQLRLDHVSPKDYAHSRNALDGAVTHLSPYLTHGFLSVPDVASAMYHQYR
VGVQHKLIYELGWREYFQHMHHHLGDGIAQSLHEGVLPESEYSTELPEDVRHACTRVPVI
DTAIRMLYTTGYLHNHARLWVASYIVHLRKVHWRVAADWMYSHLLDGDVASNYLGWQWVA
ATGSNKPYLFNADTVEKFAPEIWHSRATSIDVSYELMDILARSSATVAQVRKNELAWDEP
VVFSEPPADLGFTKPVASDVAGQHVWLVHPWVLADLPKDVPADVVCVAVAFAEHTQAHPW
NALRWHFVGERMTALTPHRWFGSADEVLAALAHAQSVQTVAHLCLPDLAAGHVQLRPAPR
LFRHLDKPMDSFSKWWVQVNKNVRHLQQLVYPLPARPPAS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaattcccacccacgccagaagccgcacagctgcggcttgaccacgtcagcccc
aaagactatgcgcacagccgcaacgccttggatggcgcggtgacgcatttgtcgccgtac
ctcacccatggttttttgagcgtgcccgatgtggccagcgccatgtaccaccagtaccgc
gtaggtgtacagcacaagctgatttatgagttgggctggcgcgaatatttccaacacatg
catcaccatttaggtgatggtattgcgcagtccttgcacgaaggtgtcttgccagagtcc
gagtacagcaccgagctacccgaggatgtgcgccacgcttgcacccgcgtgcctgtgatt
gacaccgccatacgcatgctctacaccacgggttatttgcacaaccatgcgcgcctgtgg
gtggccagctacatcgtgcatttgcgcaaagtgcattggcgcgtggccgccgattggatg
tacagccatttgttggacggcgatgtggccagcaactatctggggtggcaatgggtggcc
gcgacgggaagcaacaaaccttatttgttcaacgccgacaccgtcgaaaaattcgctcct
gaaatttggcacagccgcgccacatcgattgacgtgagctacgagctgatggacatcttg
gcccgtagctcggccactgtggcgcaagtgcgtaaaaacgaattggcttgggatgagcca
gtggtgttctccgaaccacccgctgatttagggtttacaaaacctgtggcaagtgatgtg
gcgggccaacatgtgtggctggtgcatccgtgggtgctggctgatttgccaaaggacgta
cctgcggatgtggtgtgcgtggccgtggcatttgcagagcacacgcaagcgcatccatgg
aatgctttgcgttggcactttgtgggtgaacgcatgacggcactcacgccgcaccgttgg
tttggttctgctgacgaggtgttggccgcattggcccatgcgcaaagtgtgcaaaccgtg
gcgcatttgtgtttgccagaccttgctgcaggtcatgtgcaattgcgacctgcaccacgc
ctgttccggcacctcgacaagccgatggattcgttcagcaaatggtgggtgcaggtgaac
aagaacgtgcggcacttgcagcagttggtgtacccgctgcctgcgcgaccacccgcgtct
taa
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