Limnohabitans sp. INBF002: LINBF2_25120
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Entry
LINBF2_25120 CDS
T09962
Symbol
recA
Name
(GenBank) protein RecA
KO
K03553
recombination protein RecA
Organism
limi
Limnohabitans sp. INBF002
Pathway
limi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LINBF2_25120 (recA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
limi03400
]
LINBF2_25120 (recA)
DNA repair and recombination proteins [BR:
limi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LINBF2_25120 (recA)
RecFOR pathway proteins
LINBF2_25120 (recA)
TLS (translesion DNA synthesis) factors
Other SOS response factors
LINBF2_25120 (recA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecA_N
RecA_C
ATPase
Rad51
MT3502_N
AAA_25
ATPase_2
AAA_16
AAA_24
CobU
ABC_tran
AAA_14
nSTAND_NTPase5
MobB
AAA_22
NPHP3_N
AAA_35
TK
DnaB_C
AAA
RRM_R3HCC1L
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
BDU54277
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All DBs
Position
complement(2545306..2546436)
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AA seq
376 aa
AA seq
DB search
MNNKPIVADSEKAKALQAALAQIEKQFGKGTIMRLGEGEVIDDIQVVSTGSLGLDIALGV
GGLPRGRVIEIYGPESSGKTTLTLQVIAEMQKQGGTCAFVDAEHALDSQYAQKLGVNLQD
LLISQPDTGEQALEVVDSLVRSGAVDLVVVDSVAALTPKAELEGDMGDSLPGLQARLMSQ
ALRKLTASIKKTNCTVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGTIKR
GDEAVGNETKVKVVKNKVAPPFKTAEFDILFGEGISRQGEIIDMGVNAKVIEKSGAWYAY
QGEKIGQGRDNAREFLRENEALAFEIENKVRESLGIPLLAGGVDAPAAKEEKAPKASKAA
KEAKGAADADADGVVA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacaaacccatcgtcgctgacagcgaaaaagccaaagccctccaagccgccttg
gcacaaatcgaaaaacaattcggcaagggcaccatcatgcgcttgggcgaaggcgaagtg
attgacgacatccaagtcgtctccaccggctcgttgggtttggacatcgccttgggcgtg
ggtggtttgccccgtggtcgcgtgattgaaatctacggcccagagtcatccggcaaaacc
accctcaccttgcaagtcattgccgagatgcaaaagcaaggcggcacttgcgcctttgtg
gatgctgagcacgctttggattcgcaatacgcccaaaaactcggcgtgaacttgcaagac
ctgctcatcagccagcccgacaccggcgaacaagccctcgaagtggtggacagcttggtg
cgttccggcgcggtggatttggtggtggtggactctgtggcagccctcacacccaaggcc
gaactcgaaggcgacatgggcgattcattgccaggcttgcaagcccgtttgatgagccaa
gcgctgcgtaaattgacggcttccatcaagaagaccaattgcaccgttatcttcatcaac
cagatccgtatgaagattggcgtgatgtttggttcacccgaaaccaccaccggcggtaac
gcgctcaagttctacgcctcggtgcgcttggacattcgccgcaccggcaccatcaagcgt
ggtgacgaggccgtgggtaacgagaccaaagtcaaagtggtgaaaaacaaagtggcgcct
ccgttcaagacagccgagttcgacatcttgtttggcgaaggcatcagccgccaaggtgaa
atcattgacatgggtgtgaacgccaaagtcattgaaaagtctggcgcttggtatgcgtac
caaggcgaaaagatcggccaaggccgcgacaacgcccgtgagttcttgcgtgaaaacgaa
gccttggctttcgaaatcgaaaacaaggtgcgcgaatctttgggtattcctttgttggct
ggcggtgtagatgcacctgcggccaaagaagaaaaagcgcccaaggcctctaaggctgcc
aaagaagccaaaggcgctgcggacgcagatgccgacggcgtggtggcttaa
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