Limnohabitans sp. INBF002: LINBF2_25330
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Entry
LINBF2_25330 CDS
T09962
Name
(GenBank) ribosomal RNA small subunit methyltransferase E
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
limi03009
]
LINBF2_25330
Enzymes [BR:
limi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
LINBF2_25330
Ribosome biogenesis [BR:
limi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LINBF2_25330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
BDU54298
LinkDB
All DBs
Position
complement(2568539..2569270)
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AA seq
243 aa
AA seq
DB search
MARFYCPLPLVPGQVVDLPPTAARHVQVLRMQPGHTLTLFNGEGGEFTAEVQHMGRSDVR
VVVGEHRAVECEAACQVHLAVGMPANERMDWLVEKATELGVHRITPLMTERSVIRLTGER
AEKKQAHWQAVAASASEQCGRNRVPVIDMPERLDAWLARQTTQADVVHGVLSLHASTQPL
NALREGAATSAKSWVLLNGPEGGLTDAEDAAARAKGFTALSLGERVLRAETAALGALALL
TLA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcttttactgccccctgcccttggtgcctggccaagtggtggacttgccaccc
acagccgcccgccatgtgcaggtgctgcgcatgcagcccggtcacacgctgactttgttc
aacggcgaaggtggtgaattcaccgccgaagtgcaacacatgggccgcagcgatgtgcgc
gtggtcgtgggcgagcaccgcgccgtggaatgcgaagcagcgtgccaagtgcacctcgcc
gtgggcatgcccgccaacgagcgcatggattggctggtggaaaaagccaccgagttgggc
gtgcaccgcatcacccccttgatgactgagcgcagcgtgattcgcctgacgggtgaacgc
gccgaaaagaaacaagcccattggcaagcggtggccgccagcgcgagcgagcaatgcggc
cgcaaccgcgtgcctgtcatcgacatgcctgagcgcttagacgcgtggctggcacgtcaa
acgacgcaggccgatgtggtgcatggggtgttgtcgttacacgcgagcacgcagcctttg
aatgcgttgcgtgaaggcgcagcgaccagcgcaaagtcttgggtcttgctcaatggccca
gaaggtggcttgaccgatgcagaagatgcggcggctcgcgccaaaggcttcacggccttg
agcttgggcgagcgcgtcttgcgtgccgagaccgcggccttaggcgctttggccttgctc
accctcgcatga
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