Limnohabitans sp. MORI2: LMORI2_04210
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Entry
LMORI2_04210 CDS
T11141
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
limm Limnohabitans sp. MORI2
Pathway
limm00300
Lysine biosynthesis
limm00470
D-Amino acid metabolism
limm01100
Metabolic pathways
limm01110
Biosynthesis of secondary metabolites
limm01120
Microbial metabolism in diverse environments
limm01230
Biosynthesis of amino acids
Module
limm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LMORI2_04210 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LMORI2_04210 (dapF)
Enzymes [BR:
limm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LMORI2_04210 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
BDU57439
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Position
404267..405124
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AA seq
285 aa
AA seq
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MRIRFTKMQGAGNDFVVLDETTERLHLTPAHYRFLADRHFGVGADQILTVRPAPQPDVDF
EYVIHNADGGEVEQCGNGSRCFVRFVREQGLTDKTTVRVKVHGGVITLQEMSDGQVTVDM
GAPVFDLPLVPFAPKYAVAINDTQWQLQLGNGDSPKVGVVSMGNPHAVQVVDDVDTALVL
EQGPLIENHAAFPKRVNAGFMQVLNRGAVRLRVFERGAGETLACGTGACAAVVTGIRWGL
LDSRVTVQTHGGTLTIEWQGGDTSVRMTGPATTVFQGEITLPDTL
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattcgcttcaccaaaatgcagggcgccggcaacgacttcgtggtcttggacgag
accacggagcgcttgcacctcacgcccgctcactaccgctttctggccgaccgccacttt
ggcgtgggcgcagaccaaattctcactgtgcgccccgcgccgcagcctgacgtggacttt
gaatacgtcatccacaacgccgatggcggcgaggtggagcagtgcggcaatggctcacgc
tgctttgtgcgctttgtgcgcgaacagggcctgaccgacaaaaccacggtgcgcgtcaaa
gtgcatggcggtgtcatcaccttgcaagagatgtccgatggtcaagtgacggtcgacatg
ggggcgcccgtgtttgatttgccactagtgccctttgcacccaaatacgccgtggcaatt
aacgacacgcaatggcaattgcaactgggcaatggtgactcacccaaagtgggcgtggtg
tctatgggtaacccacatgccgtgcaagtggtggacgatgtggacactgccctcgtgttg
gagcaaggccctctcattgaaaaccatgcggcttttcctaagcgcgtgaacgcgggtttc
atgcaagtgctcaatcgcggtgccgtgcgcttgcgcgtgtttgagcgcggcgctggcgaa
accctggcttgcggcacaggtgcatgtgcggcggtcgtcaccggcattcgctggggcttg
cttgattcacgcgtgacggtgcaaacccacggcggcacactcaccattgaatggcagggc
ggcgacacatctgtgcgcatgactggccctgccaccaccgtctttcaaggcgaaatcact
cttccagacactttatga
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