Limnohabitans sp. MORI2: LMORI2_04670
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Entry
LMORI2_04670 CDS
T11141
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
limm Limnohabitans sp. MORI2
Pathway
limm02024
Quorum sensing
limm03060
Protein export
limm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LMORI2_04670 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LMORI2_04670 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LMORI2_04670 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
limm02044
]
LMORI2_04670 (ffh)
Enzymes [BR:
limm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LMORI2_04670 (ffh)
Secretion system [BR:
limm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LMORI2_04670 (ffh)
Eukaryotic Sec-SRP protein
LMORI2_04670 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
AAA_30
APS_kinase
Helicase_RecD
cobW
nSTAND3
AAA_16
AAA_24
AAA_33
AAA_31
AAA_19
Thymidylate_kin
ArsA_ATPase
6PF2K
T2SSE
YqeC
TsaE
ResIII
AAA_14
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BDU57485
LinkDB
All DBs
Position
454746..456209
Genome browser
AA seq
487 aa
AA seq
DB search
MSLAKIMSNSLAFRYTRKTKPYQGVPMASALTDKLSRLVKHISGQARITESNVADMLREV
RMALLEADVALPVVRDFIARVKDKALGQEVIGSLQPGQALVAIVNQELAATIGEGVSDLN
LAAQPPAVVLMAGLQGAGKTTTTAKLARWLINQRKKKVLTVSGDVYRPAAIEQLKTVTAQ
AGAEWFPSSPDQKPADIARAALDYARKHYFDVLLVDTAGRLAIDEALMAEIKQLHSVLNP
VETLFVVDAMQGQDAVNTAKAFSDALPLTGIVLTKLDGDSRGGAALSVKQITGAPIKFAG
TSEKLDGLELFDANRHAGRVLGMGDIVALVEQVTAGVDMAAAQKLAEKVKRGDSFDLNDF
LAQIQQMRSMGGLSTIMDKLPTQMAAKAGQVDMDKAEKDIGRKQGIIHSMTPKERAKPEL
IKATRKRRIAAGAGVQVQDVNRLLKEFEQMQTMMKKMSGGGMMKMMKKLGAMKGMGGFGG
GGFPGMR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggctaaaatcatgtccaacagtttagcgtttcgctacacacgaaaaaccaag
ccctatcaaggggtacctatggcctcagcccttaccgacaaactctcgcgcctcgtcaaa
cacatcagcggacaggcccgcatcaccgaaagcaacgtggccgatatgttgcgcgaggtg
cgcatggccttgctcgaagccgacgtggctttgcccgtggtgcgcgacttcattgcacgc
gtcaaagataaagcccttggccaagaagtgattggctccttgcagcccggtcaagccttg
gtggccatcgtcaaccaagagttggccgccaccattggcgagggggtgagcgacttgaac
ctcgccgcccagccgcctgccgtggtgttgatggcgggtttgcaaggtgctggtaaaacc
accaccaccgccaagctggcgcgttggttgattaaccagcgcaagaaaaaagtgctgacg
gtgtccggcgacgtgtatcgccctgctgcgattgagcagctcaaaactgtcaccgcgcaa
gcgggtgccgagtggttccccagttcgcccgaccaaaaacccgccgacattgcccgcgct
gcgctggactacgcacgcaaacattactttgatgtcttgctggtcgacaccgccggtcgt
ttggcgattgacgaagccttgatggccgaaatcaaacaactgcacagtgtgttgaaccct
gttgaaaccttgtttgtggtcgatgccatgcaaggtcaagacgcggtgaacacagccaag
gcttttagcgatgcgctgcctttgacgggcattgtgctgaccaagctcgatggcgactca
cgtggtggtgcggccttgtcggtcaagcaaatcacgggtgcgcccattaaatttgccggt
accagtgagaagctggatggcttggagttgttcgatgccaaccgccatgcaggccgcgtg
ctcggtatgggcgacatcgtggccttggtcgagcaagtcaccgccggcgtggacatggcg
gctgcgcaaaagctggccgagaaggtcaagcgcggcgacagctttgacctcaacgacttt
ttggcgcaaattcaacaaatgcgctcgatgggcggcttgtccaccatcatggataaatta
cccacacagatggcggccaaagccggccaagtcgatatggacaaggccgagaaagacatt
ggccgcaagcaaggcatcatccacagtatgacacccaaagagcgcgccaagcccgagctc
atcaaagccacgcgcaagcgccgcattgccgctggtgcgggtgtgcaggtgcaagacgtg
aaccgtctgctcaaagaatttgagcaaatgcaaaccatgatgaagaagatgagtggcggc
ggcatgatgaagatgatgaaaaagctcggcgccatgaaaggcatgggcggttttggcggc
ggtggttttccaggcatgcgctga
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