Limnohabitans sp. MORI2: LMORI2_04790
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Entry
LMORI2_04790 CDS
T11141
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
limm Limnohabitans sp. MORI2
Pathway
limm02020
Two-component system
limm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
limm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LMORI2_04790 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LMORI2_04790 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
limm03021
]
LMORI2_04790 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
limm02035
]
LMORI2_04790 (fliA)
Transcription machinery [BR:
limm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LMORI2_04790 (fliA)
Bacterial motility proteins [BR:
limm02035
]
Flagellar system
Flagellar assembly proteins
Stator
LMORI2_04790 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_10
HNH_repeat
UPF0122
GerE
HTH_23
MarR_2
PhyR_sigma-like
DUF7343
KORA
SatD
TrmB
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
BDU57497
LinkDB
All DBs
Position
468521..469279
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AA seq
252 aa
AA seq
DB search
MRTLSPVQMYESCKPKGEDLVMAHLGLVKRVALHLKARIPAFMELDELVQVGMIGLLEAS
RAFDPTKGIEFENFAHSRVRGAMLDEVRRLSFLPRSAVAFNKEHNTTVHALAAELGRTPT
QSEIAEYMGKDLEEFHKERGKAKRFETYSMEVVTEEVMTIADDSSQQPEVIVEEAEFMDA
VTDAIAQLPEREQLVMQLYYVEEFNLKEIGETLGVSESRVSQILSSVVKKLRGTLKVDNA
AETEKVETRRRA
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgagaacactatcccccgtacaaatgtacgaatcttgcaagcctaaaggcgaagatttg
gtcatggcccatttgggcttggtcaaacgtgtggctttgcacttgaaggctcgtattcct
gcattcatggagctcgatgagctggttcaagtgggcatgattggtctgctcgaagcttct
cgtgcttttgatcccaccaagggcatcgagtttgaaaacttcgcacacagccgtgtgcgt
ggtgcgatgctggatgaagtgcggcgattgtcgtttttgcctcgctctgcagtggctttc
aacaaagagcacaacaccacggtgcatgcgctagcagctgagttgggtcgcacgccgacc
caatcagaaattgccgagtacatgggcaaagatcttgaagagtttcacaaagagcgcggc
aaagccaagcgctttgagacttattcgatggaagtggtgaccgaagaggtgatgaccatt
gccgatgacagctcgcagcaaccagaagtgattgtggaagaggccgaattcatggacgcg
gtgacggatgcgattgcgcagttgcctgaacgtgagcagctcgtcatgcagctttactac
gttgaagagttcaacctcaaagagattggcgagacactgggcgtgagtgaatcgcgcgtg
agtcaaatcttgtcctccgtagtcaagaagttgcgtggcactctcaaggttgacaacgct
gccgaaaccgagaaggttgagacaaggagacgcgcatga
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